ggKbase home page

NECEvent2014_7_3_scaffold_1933_1

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: 37..687

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator CsgD n=75 Tax=Enterobacteriaceae RepID=A7ZYZ3_ECOHS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 216.0
  • Bit_score: 435
  • Evalue 3.30e-119
  • rbh
DNA-binding transcriptional regulator CsgD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 216.0
  • Bit_score: 435
  • Evalue 9.40e-120
  • rbh
CsgBAC operon transcriptional regulatory protein {ECO:0000313|EMBL:EZJ78127.1}; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 216.0
  • Bit_score: 435
  • Evalue 4.70e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGTTTAATGAAGTCCATAGTATTCATGGTCATACATTATTGTTGATCACTAAACCTTCTTTGCAGGCGACAGCTCTCTTGCAGCACCTTAAACAATCGCTGGCAATTACAGGAAAATTACATAATATTCAACGTTCTCTGGACGATATCTCTTCAGGCTCTATTATTCTTCTGGATATGATGGAAGCGGATAAAAAGCTTATCCATTATTGGCAGGATACTTTGAGCAGGAAAAACAACAATATCAAAATATTGTTGCTAAATACGCCTGAAGATTACCCGTACCGCGACATTGAAAACTGGCCTCATATCAACGGCGTTTTTTATTCCATGGAGGATCAAGAACGTGTTGTCAATGGGTTGCAAGGCGTCCTGCGCGGCGAATGCTACTTTACGCAAAAGCTTGCCAGCTACCTGATTACGCATTCAGGTAACTATCGTTATAACAGCACGGAATCAGCCCTCCTTACTCATCGGGAAAAAGAGATCCTGAATAAGCTGCGTATCGGCGCGTCTAATAACGAGATCGCTCGTTCGTTGTTCATCAGCGAAAATACGGTTAAAACGCATCTTTATAATCTTTTCAAGAAGATAGCCGTAAAAAACCGGACACAAGCGGTTTCCTGGGCAAACGATAACCTCAGGCGATAA
PROTEIN sequence
Length: 217
MFNEVHSIHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR*