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NECEvent2014_7_3_scaffold_2600_1

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(289..528)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AlpA family n=4 Tax=Enterobacteriaceae RepID=J5VU46_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 165
  • Evalue 2.40e-38
AlpA family transcriptional regulator {ECO:0000313|EMBL:EOQ46270.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 165
  • Evalue 3.30e-38
prophage CP4-57 regulatory protein similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 73.0
  • Bit_score: 114
  • Evalue 1.00e-23

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Taxonomy

Citrobacter sp. KTE151 → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGACCACGTTGAATACGAATATTAATGCCAGCCCTGACACACTGCTTTCAGCTCAGGACCCGCTTATCGACATGACCTTTATCACCACGTTTACCGGGATGACCGACAAATGGTTTTACAAACTGATTGGCGACGGGTTGTTTCCGAAACCCATCAAGCTGGGGCGCAGCTCCCGCTGGCGCAGAAGCGAGGTGGAAGCCTGGATGCAGCAGCGTATTGCTGATTCCCGTGGCGTCTGA
PROTEIN sequence
Length: 80
MTTLNTNINASPDTLLSAQDPLIDMTFITTFTGMTDKWFYKLIGDGLFPKPIKLGRSSRWRRSEVEAWMQQRIADSRGV*