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NECEvent2014_7_3_scaffold_2653_1

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(3..170)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory protein, LacI family n=2 Tax=Escherichia coli RepID=I2SNP4_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 56.0
  • Bit_score: 111
  • Evalue 3.70e-22
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 56.0
  • Bit_score: 111
  • Evalue 1.10e-22
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFJ87585.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 56.0
  • Bit_score: 111
  • Evalue 5.30e-22

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 168
ATGGAAAAAACACGTAAGCGCCGTGGTACCGGACGGGTGACGCTGCAGGAGGTCGCTAACTTTGCAGGTGTCGGAACCATGACCGTTTCCCGTGCGCTGAGAACACCGGAACAGGTATCTGACAAGCTGAGGGAAAAGATAGAACAGGCCGTAGAAGAGTTGGGTTAT
PROTEIN sequence
Length: 56
MEKTRKRRGTGRVTLQEVANFAGVGTMTVSRALRTPEQVSDKLREKIEQAVEELGY