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NECEvent2014_7_3_scaffold_2220_1

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(3..317)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding transcriptional activator, formate sensing n=2 Tax=Escherichia coli RepID=L4JN02_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 212
  • Evalue 1.70e-52
hydrogenase-4 transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 212
  • Evalue 4.80e-53
DNA-binding transcriptional activator, formate sensing {ECO:0000313|EMBL:EOV77380.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 105.0
  • Bit_score: 212
  • Evalue 2.40e-52

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGGCTATGTCAGACGAAGCGATGTTTGCCCCGCCGCAAGGAATAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCGCAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAGTGGAATGGCGGAGCTACGCTTTATT
PROTEIN sequence
Length: 105
MAMSDEAMFAPPQGITIEAVNGMLAERLAQKHGKASLLRAFIPLPPPFSPVQLIELHVLKSNFYYRYHDDGSDVTATTEYQGEMVDYSRHAVLLGSSGMAELRFI