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NECEvent2014_7_3_scaffold_3473_4

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(1248..1439)

Top 3 Functional Annotations

Value Algorithm Source
RHS repeat-associated core domain protein n=5 Tax=Escherichia coli RepID=N2YPQ0_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 63.0
  • Bit_score: 141
  • Evalue 3.80e-31
rhsA; rhsA element core protein RshA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 63.0
  • Bit_score: 141
  • Evalue 1.10e-31
RHS repeat-associated core domain protein {ECO:0000313|EMBL:KDY08773.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 63.0
  • Bit_score: 141
  • Evalue 5.30e-31

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 192
TATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATAG
PROTEIN sequence
Length: 64
YITQDPIGLKGGWNFYQYPLNPVTNTDPLGLEVFPRPFPLPIPWPKSPAQQQADDNAAKALTK*