ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

NECEvent2014_7_3_scaffold_3679_1

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(3..176)

Top 3 Functional Annotations

Value Algorithm Source
agaV; PTS system N-acetylgalactosamine-specific transporter subunit IIB (EC:2.7.1.69) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 58.0
  • Bit_score: 116
  • Evalue 2.60e-24
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Escherichia coli KTE51 RepID=L3KF99_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 58.0
  • Bit_score: 116
  • Evalue 9.20e-24
N-acetylgalactosamine-specific PTS system transporter subunit IIB {ECO:0000313|EMBL:ETX67933.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 58.0
  • Bit_score: 116
  • Evalue 1.30e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 174
ATGCCAAACATTGTATTAAGTCGCATTGATGAACGTCTGATTCACGGTCAGGTTGGTGTGCAATGGGTCGGGTTTGCGGGGGCAAACCTGGTGCTGGTCGCTAATGATGAGGTGGCTGAAGATCCAGTGCAGCAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTA
PROTEIN sequence
Length: 58
MPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQQNLMEMVLAEGIAV