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NECEvent2014_7_3_scaffold_4517_2

Organism: NECEvent2014_7_3_Citrobacter_freundii-rel_51_6_v_partial

partial RP 2 / 55 BSCG 1 / 51 ASCG 2 / 38
Location: comp(291..1103)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide core biosynthesis protein n=3 Tax=Citrobacter RepID=J0M3U1_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 258.0
  • Bit_score: 517
  • Evalue 1.10e-143
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX70581.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 258.0
  • Bit_score: 518
  • Evalue 5.30e-144
Lipopolysaccharide core biosynthesis protein RfaZ similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 253.0
  • Bit_score: 317
  • Evalue 4.70e-84

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
GTTATTATTTCAAAAATAACATCCACGGTAACCGCCATGCTCATCACACACGAAATACTTAATGGAATAATGGGTGAAAGAGTTTCCGATGATTGTATTATTTACTTGTCTGGACCTTCATCATTAGATACGCCCCTTGAGATAATGCGTAGTAAAAGCTGCATTTGCGTAAATGGTAGCGAAGGCTATTTAATTAACAACAATATCCCTGTATTTCTTTATGTTGTTTGTGACGGTTCTTTTTATGAAAACAATAAAGACTTATTTTATAAGTATTCCGCCTATGCTCAGCATACCTTTATTAGTGAAGATGTTATTAAAAGAGCTGATTCAACAGAGATAGGGAACTTGCTCAACACATGTTTTCTGTTAAAGGACATTTGCAAATCCAGAGGTGGTATCGGTAGAAAGATTCGCTATAAAATAAAAACAATGACTAACAGGAATCTCCGAATTAAATGCTCTGCATTCAGAAAAGTGAAAACAATCGCATTTTCAACTGATGTAACACATGGTCATTTTGGTAGTGCTACGGTCGCATTTAGCGCGTTACAAATAGCCATTAGTCTAAAATTTGAAAGAATAATTTTTTCAGGTTTAGATTTGAAAGGTGGCTGTAAACGGTTTTACAATGAAGTTAACGCTCAACCCACGACTCTACCCGCTGATCTTAGCTTTATATTAAGGTCATTTTCTTATGTAAGTAGCCACTATGACGGTAAGATCTACAATCTTTCTCCACAAACAGCTATTCCCTACGATGTTATTCCGTTCATCAATACAGAAGAAGTAGCTTGTTCCACCTCCTACTAG
PROTEIN sequence
Length: 271
VIISKITSTVTAMLITHEILNGIMGERVSDDCIIYLSGPSSLDTPLEIMRSKSCICVNGSEGYLINNNIPVFLYVVCDGSFYENNKDLFYKYSAYAQHTFISEDVIKRADSTEIGNLLNTCFLLKDICKSRGGIGRKIRYKIKTMTNRNLRIKCSAFRKVKTIAFSTDVTHGHFGSATVAFSALQIAISLKFERIIFSGLDLKGGCKRFYNEVNAQPTTLPADLSFILRSFSYVSSHYDGKIYNLSPQTAIPYDVIPFINTEEVACSTSY*