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ACD9_152_1

Organism: ACD9

partial RP 33 / 55 MC: 8 BSCG 28 / 51 MC: 5 ASCG 0 / 38
Location: comp(214..660)

Top 3 Functional Annotations

Value Algorithm Source
smpB; ssrA RNA (tmRNA)-binding protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 147.0
  • Bit_score: 153
  • Evalue 4.90e-35
SSRP (db=PatternScan db_id=PS01317 from=22 to=34 evalue=0.0 interpro_id=IPR020081 interpro_description=SsrA-binding protein, conserved site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=3 to=146 evalue=6.9e-67 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.90e-67

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 447
ATGCCCACATTAGCCACAAACAAAAGAGCTCGATTTGACTATGAACTTCAAGATACGTATGAGGCTGGCTTAATGTTGTCCGGAGCTGAGGTTAAATCTGTTAAAAACGGGCATATAAGCCTAAAAGGAAGCTTTGTGACAATGCACGAGAGTGAATTATACTTGACGAATGCCAACATCTCGCCATATCCGCATGCCAATCAAAAAATTGCCTACGATCCAACCCGCTCTCGAAAGCTGCTTGTGCGCAAAGCTGAAATCAAGTCCTTAATTGGAAAATTACACGTAAAGGGCTTGACACTGGTGCCTCTTCGTGTGTATACTAAGAGACGACTCATTAAGTTGGAATTCGCTGTAGGACGCGGAAAAAAGGCTTTTGACAAGCGATCAGACATAGCCAAGAAAGAGGACAAAAGGAACATGGAAAGAGCCCTCAAGAGTACTTGA
PROTEIN sequence
Length: 149
MPTLATNKRARFDYELQDTYEAGLMLSGAEVKSVKNGHISLKGSFVTMHESELYLTNANISPYPHANQKIAYDPTRSRKLLVRKAEIKSLIGKLHVKGLTLVPLRVYTKRRLIKLEFAVGRGKKAFDKRSDIAKKEDKRNMERALKST*