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gwa2_scaffold_3554_17

Organism: GW2011_AR9

partial RP 30 / 55 MC: 3 BSCG 16 / 51 ASCG 19 / 38
Location: 13432..14646

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LXX1_HIPMA similarity UNIREF
DB: UNIREF90
  • Identity: 27.0
  • Coverage: 0.0
  • Bit_score: 136
  • Evalue 1.00e+00
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=AR9 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 404.0
  • Bit_score: 798
  • Evalue 3.90e-228
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 424.0
  • Bit_score: 137
  • Evalue 9.90e-30

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Taxonomy

AR9 → Woesearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 1215
ATGGTGGTTCAAGATTTTCTTATGCCCGACATTAGGGATAGATATCGGGCTGGTTCTCCGGAGTTGCTGAGCCGTGAAAAAGAAGTAGAGATTGGCAAGTCCTTTGAGGCAGAACATCGAAATTTGCTTTTTCAGCTTCAGAGCTCCCAACAGCCGGAAATGATAGATTTCTATAAAGAAGCCCTCTATAGCAGATCTCCCTATGTTTCAAAAATGAATGAGATAAGGGCCGATTGGGATAAACTGATGGATTTAACTTGTTATCAGATGTCGAGGTCATATACCCGTGCTGCCGCCCAAAATCTACGGCTTCATCTCCAGCAGGAAAAAGATAAAGTTGAATTGGCTTTACAAAGGGGGATGAATGGCCAAACTGAAGAATATCAACAGCGTGTTGCCCAACTAGAAGAAAAGATATTAAAAATAGACCGGGCTTGTATTCGGCAAGGAAAAGATAATGAGCAGTTAGTTAACCCTTATTTTGGAAGGGTCTTTAAGTACGCTCAGGAAGTGCATCCTTTGGTGGAGGAATATTTATGGGGAGCTAGTTTTGATGATCTGGTACAGGCAGGCATGGAAGGATTATTACGGGTTGCTGATAGATTTGATTATCGGAAGGAAAAGAACTTTGGTTCGATGCTCAGGTGGCCGATTAAAGGAGCTATGTTTAAAGTAGTTGCCGAAAATTCTAGTGCTACCAGTTTATCAAGGAAAGCTTCAAAAGAGAAGAGGCACTACTTTCAAGCTCAATCTAGACTGATGGAAGAGTTAGGGCGCGAACCAACAGACTTTGAGATGGCACAACATTTAGGCCTAGGCCAGCAGAGCAAAGCATTTCAAGCCAGAACAGAAATCGCGTTGATGAACGGAACCCATATTTCTTTGGATGAAAACGTGTTCTCAAACGATCCTGATAGTCCTACTTTGAAAGATAGGGTAATAGATCAAACCCTCATTCCAGCAGATAAAAGTATTGAACTCCAGGAATTGGCACCTTTGGAAAGTGCGGTAGAATCAGTTCTCTCCACGCTGCGCCAACGTGAAGAACAAGTAGTGAGAATGCATTTTGGGATAGGGCATCCTCAAACCTATACTCTGGAAGAAATAGGGAAAGTACAGGCTGTTTCAAAAGCACGAATTCATCAAATAGAAAAAGACTCTTTGGGCAAATTGATGCATCCTTCCCGCCGGCAGGTTCTCGAGAAATACCTCTAA
PROTEIN sequence
Length: 405
MVVQDFLMPDIRDRYRAGSPELLSREKEVEIGKSFEAEHRNLLFQLQSSQQPEMIDFYKEALYSRSPYVSKMNEIRADWDKLMDLTCYQMSRSYTRAAAQNLRLHLQQEKDKVELALQRGMNGQTEEYQQRVAQLEEKILKIDRACIRQGKDNEQLVNPYFGRVFKYAQEVHPLVEEYLWGASFDDLVQAGMEGLLRVADRFDYRKEKNFGSMLRWPIKGAMFKVVAENSSATSLSRKASKEKRHYFQAQSRLMEELGREPTDFEMAQHLGLGQQSKAFQARTEIALMNGTHISLDENVFSNDPDSPTLKDRVIDQTLIPADKSIELQELAPLESAVESVLSTLRQREEQVVRMHFGIGHPQTYTLEEIGKVQAVSKARIHQIEKDSLGKLMHPSRRQVLEKYL*