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gwa2_scaffold_243_2

Organism: GW2011_AR10_to_be_removed

near complete RP 42 / 55 MC: 13 BSCG 18 / 51 MC: 2 ASCG 36 / 38 MC: 4
Location: 6174..7337

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Salpingoeca sp. (strain ATCC 50818) RepID=F2TZ84_SALS5 similarity UNIREF
DB: UNIREF90
  • Identity: 24.0
  • Coverage: 0.0
  • Bit_score: 64
  • Evalue 6.00e+00
baaA1; trimeric autotransporter adhesin Tax=RIFOXYB1_FULL_WS6_33_15_curated UNIPROT
DB: UniProtKB
  • Identity: 31.8
  • Coverage: 299.0
  • Bit_score: 111
  • Evalue 2.80e-21
seg (db=Seg db_id=seg from=225 to=236) iprscan interpro
DB: Seg
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0

Lists

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Notes

Fibronectin domain Cindy Castelle (9/25/13)

Taxonomy

RIFOXYB1_FULL_WS6_33_15_curated → Dojkabacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGGTTTGGATGTTGGCGCTGACTGTGATTATCACCTCCGGCCCTGACATAAGCATTGCTGACTTGAATGGTGACACTGCCGCTGCTTACTGGGATTCAACCAATGATTCCGGAACGGATTTGAACATTAATGGCGCCGAAGCAGGGGTAACATGCAAGTGGGACACCACTTCGAAAGCATACTATGATTTGCTGTCAAACAATTGCAATGCTGCTTCCGGCAATTTCATCAGGTGTGACTTTGGTGCAATTACCCAAACTGCTTCCGCCACAAGATATTATGCTTGCAAGGATTCATTGGACAATAATACAACTGTTCAGTCTGTAAGCTTTGGCGTTGATTGGACTGTTCCAACAACAAGTGATGATTCCAGCACTGCAATTGCTGCTCCAACTTATACTGTTACATTAACTGAAGCGGACAATGTTTCAAATTCAACTGACACAACCTCTTATTACTGCAAGGACACCAACAACAGCTGCACTCCCACAACCTCAATTGACAATGGCGGCACTGCTTCATTTGATGCAAGCAACAGGGGCTTAAATTATTTGCGTTATTATTCGGTTGATGCTGCCGGCAACACTCAAAGCACTGCCAGCAAAACCATTAACATCAACCAGTTGCCGGGCTTTACTTCTGCAACAGCCGACATCGGCAACTCCAACCCAACAATTAAGGGCGGAACAAGCATTACCATTACCACTGTTGCTTCAGATGCTGACGCAACCCAAACACTCAAACTTGTTATCTGCAAGAGCACTGGTGTTTCCGGAACAGATTGTGATGGCGGCGCACCAGACACTTATTGCTCTTCAACCGGCTCTGCTTCCAATCCAAGCTGCGGCTGGACTGCTGAAAGCGATGACACCACGCATAACTGGTATGCTTACATTTTCAATTCCTTGAACGAGCCTGCCCCCGGCAACTACAAGACAGGCTCTTATACAACAGATTCAACTGCTCCAACTGTAACCTTGCAAACCCCTGCGGATGCTTCCTCAACCAATGATGTTGACCCTGATTTCACTGCTAATCCGAGTGAAACTGTGAGCAATTGTTATTTGCAGGTTGATGATGCTTCTAATTTTTTGAGCCAGTTCTCAGATTTGAATGGTTTGGATGTTGGCGCTGACTGTGATTATCCTCCGGCCCTGACATAA
PROTEIN sequence
Length: 388
MVWMLALTVIITSGPDISIADLNGDTAAAYWDSTNDSGTDLNINGAEAGVTCKWDTTSKAYYDLLSNNCNAASGNFIRCDFGAITQTASATRYYACKDSLDNNTTVQSVSFGVDWTVPTTSDDSSTAIAAPTYTVTLTEADNVSNSTDTTSYYCKDTNNSCTPTTSIDNGGTASFDASNRGLNYLRYYSVDAAGNTQSTASKTININQLPGFTSATADIGNSNPTIKGGTSITITTVASDADATQTLKLVICKSTGVSGTDCDGGAPDTYCSSTGSASNPSCGWTAESDDTTHNWYAYIFNSLNEPAPGNYKTGSYTTDSTAPTVTLQTPADASSTNDVDPDFTANPSETVSNCYLQVDDASNFLSQFSDLNGLDVGADCDYPPALT*