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gwa2_scaffold_4590_17

Organism: GW2011_AR10_to_be_removed

near complete RP 42 / 55 MC: 13 BSCG 18 / 51 MC: 2 ASCG 36 / 38 MC: 4
Location: comp(9876..10496)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA-processing protein RRP4 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BP98_9EURY similarity UNIREF
DB: UNIREF90
  • Identity: 34.0
  • Coverage: 0.0
  • Bit_score: 143
  • Evalue 7.00e+00
Exosome complex RNA-binding protein Rrp4 {ECO:0000313|EMBL:AJF60834.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 399
  • Evalue 3.60e-108
exosome complex RNA-binding protein Rrp4 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 399
  • Evalue 7.10e-109

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Taxonomy

archaeon GW2011_AR10 → Archaea

Sequences

DNA sequence
Length: 621
ATGCGAAAAATAGTTGTTCCAGGAGAGCTTGTAACTGAGGAAAGAAAGAGGCTTGGGAGAAACGTTTACCTTCGTGATGGCAAAATTTTCTCTGAGGTAATTGGATTAGCAGTTGAAGATGAAACGACTGCTTCGGTTGTGGCGCTTGAAGGGCGCTACATGCCTGAAAAAGGTGACATTGTAGTGGGAATTGTTGTAGGCGAAAAGTTTGCCGGCTACGACATTGACTTGAAATACTTTTACAAGGCTTTTGTTTCAAAAAAGGAGTTCATGGATTCCCTGAAAAACCATTCCGTTGTTTCAGCGAGGGTTGATAAAGTGAACGAAGTAAACGAAATTGAGTTAAGCAATGTAAGGGTTTTTTATGGCGGCATTGTTATTGGGGTTTCGCCTGTTAAAGTGCCGAGGATAATCGGGAAGGACAGCTCAATGCTGGAAGTCCTAAAGAAGGGCACGAATTCAACTCTTGTGGTGGGAAAGAATGGGTTGATTTGGGCTAAAACGGATAACTTGGCGCTGCTCGAGAAGGCGCTTGAAAAAATCCAGAGGGAATCCCACCTTGAAAACTTAACCAACAGAATATCTGAGTTTTTGGATAAAAACAAGAAAGAGGCGAAGTGA
PROTEIN sequence
Length: 207
MRKIVVPGELVTEERKRLGRNVYLRDGKIFSEVIGLAVEDETTASVVALEGRYMPEKGDIVVGIVVGEKFAGYDIDLKYFYKAFVSKKEFMDSLKNHSVVSARVDKVNEVNEIELSNVRVFYGGIVIGVSPVKVPRIIGKDSSMLEVLKKGTNSTLVVGKNGLIWAKTDNLALLEKALEKIQRESHLENLTNRISEFLDKNKKEAK*