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gwf1_scaffold_3970_15

Organism: GWF1 Unbinned

megabin RP 50 / 55 MC: 49 BSCG 51 / 51 MC: 50 ASCG 30 / 38 MC: 19
Location: comp(6328..6789)

Top 3 Functional Annotations

Value Algorithm Source
Type III effector pipB2 {ECO:0000313|EMBL:CEG08743.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 151.0
  • Bit_score: 170
  • Evalue 1.50e-39
RNA-binding protein 6 KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 153.0
  • Bit_score: 158
  • Evalue 2.10e-36
Pentapeptide repeat protein similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 157
  • Evalue 3.00e+00

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
CAGGGCGCAGACCTTCAGGGCGCATACCTTCAGGGCGCATACCTTCGGAGCGCATACCTTCAGGGCGCAGACCTTCAGGGCGCATACCTTCAGGGCGCATACCTTCAGGGCGCAGACCTTCAGCGCGCAAAAAACGCCGAGCAAGCATTTGCTCAAACTCTCATCGTCCCTGAAGGCTCTCTGATTGTTTGGAAAAGGTGTAACAGGGGTATCATTGTCAAGATGAGAGTACCCGAGGATGCAAAACGGTCAAACGCCACTGGGCGGAAATGCCGCTTTGAATTTGTTGACGTGCTTGAATTGTTCGGCGGTCACGTGGGCATATCCCAGCACGACAAAAAAACAGAATACCGCGTCGGCCAGCGTGTGATTTGTGATAAATGGGACGATAACCGTTGGAACGAATGCTCTGGCGGGATACACGCTTTTCTGACTCGCATTGAGGCAGAGAATTTCCAATGA
PROTEIN sequence
Length: 154
QGADLQGAYLQGAYLRSAYLQGADLQGAYLQGAYLQGADLQRAKNAEQAFAQTLIVPEGSLIVWKRCNRGIIVKMRVPEDAKRSNATGRKCRFEFVDVLELFGGHVGISQHDKKTEYRVGQRVICDKWDDNRWNECSGGIHAFLTRIEAENFQ*