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gwa2_scaffold_3113_28

Organism: GWA2_OD1-rel_42_14

near complete RP 41 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 11 / 38
Location: comp(28048..28464)

Top 3 Functional Annotations

Value Algorithm Source
two component transcriptional regulator, winged helix family; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_ UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 266
  • Evalue 1.80e-68
two component transcriptional regulator, winged helix family KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 120.0
  • Bit_score: 104
  • Evalue 1.90e-20
Diguanylate cyclase GGDEF domain protein similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 104
  • Evalue 1.00e+00

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Taxonomy

RLO_RIF_OD1_13_41_11 → RIF-OD1-13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGAATCATATTTTTGATTCGAGTTTCGTGCTACATGTTTCAAGTTTCATGAAAAAGATTTTATTCATCGAGGACGAACCGGCTTTACAAAAAACTCTTTCCAGCGCTTTTACCAGCGAAGGATTTGAGGTAATACAGGCCCTTGACGGCGAAACAGGAGTCCGTTTAGCTAGGCAGAAAAAGCCCGATCTGTTACTTCTTGATCTCATTCTTCCAAAAATGGATGGTTTTGAGGTATTGCGCCAACTACAGGCGGACCCGGAAACAAAATCCATACCGGTAGTAGTGCTTACGAACCTTGAGGGTATGGGTGAGGTTCAAAAAGTCATAGAATTGGGAGCCAGGGATTATCTTGTAAAAACCAATTATAAACTTGATGAATTGGTGGCAAAAGTAAAAACATCTCTCAACCTATAA
PROTEIN sequence
Length: 139
MNHIFDSSFVLHVSSFMKKILFIEDEPALQKTLSSAFTSEGFEVIQALDGETGVRLARQKKPDLLLLDLILPKMDGFEVLRQLQADPETKSIPVVVLTNLEGMGEVQKVIELGARDYLVKTNYKLDELVAKVKTSLNL*