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gwa2_scaffold_917_21

Organism: GWA2_OD1-rel_42_14

near complete RP 41 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 11 / 38
Location: 17313..17894

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 193.0
  • Bit_score: 383
  • Evalue 1.90e-103
ECF subfamily RNA polymerase sigma-70 factor KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 200.0
  • Bit_score: 95
  • Evalue 2.10e-17
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 98
  • Evalue 1.00e+00

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Taxonomy

RLO_RIF_OD1_13_41_11 → RIF-OD1-13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGCCCGATGACACTCAAAATCAAGATACAGAAAATACCCATGACGAGATAATTTTAGACGGTTCCCAAAAAGACCCCCGACTTTTTGAAATAATAGTCCAAAAATACCAAGCCCCGTTTTTAAGGACAGCCAAGAGAATCGTGCATCAAAGAGAAGATGCCGAAGATATAGTGCAGGAAGCTTTCTTAAAGATTTACTCCAAGGCCAAACTATTCAAAAAAAGGGAGGGGGCTTCGTTTAAAAGCTGGGCCTACGCCGTTTTGGTCAATACCGCCATTTCCCACATCAGAAAATACAAGCGCTCGCACTCCAAAGATATGTCATGGGACCCGGTCCTTGATTCGGTCTTGCCCGACCCTGCCGGTTTCGGAGAAACGGAAAAACTGGAGATACAGTCGGTCTTGGCAGGAGTTTTAAAAGAGCTTCCGCCTGAATTAAAAACAGTGCTTGAAATGAGATATTTTTCGGACGACACTTATCAAACCATAGCCGCCAAAACAGGATTATCCTTGGAAAACGTAAAAATTCGCCTGCATAGGGCCAAAAAAATGGCAAGAGAGGTAATTAGTAACTTTATATAA
PROTEIN sequence
Length: 194
MPDDTQNQDTENTHDEIILDGSQKDPRLFEIIVQKYQAPFLRTAKRIVHQREDAEDIVQEAFLKIYSKAKLFKKREGASFKSWAYAVLVNTAISHIRKYKRSHSKDMSWDPVLDSVLPDPAGFGETEKLEIQSVLAGVLKELPPELKTVLEMRYFSDDTYQTIAAKTGLSLENVKIRLHRAKKMAREVISNFI*