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gwa2_scaffold_3542_16

Organism: GWA2_OD1_49_9

partial RP 38 / 55 BSCG 40 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(13785..15026)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKW12695.1}; TaxID=1618852 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_49_9.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 413.0
  • Bit_score: 807
  • Evalue 1.10e-230
RpoD subfamily RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 401.0
  • Bit_score: 364
  • Evalue 3.90e-98
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 364
  • Evalue 4.00e+00

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Taxonomy

GWA2_OD1_49_9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGGAGATTTTAGCTATACTTACGGCCATGTCTAAATCCAAGAAAACTCCCTCAAAGAAGCCCGTCAAAGCGGGGAAGAAGAAGAAAGTTTCCGCTAAGAAACCTTCAAAAAAGAGTGCCGTCGCGCGTAAAGTAGCTCCCGCTAGTCCGAAGATGGCGAGGGGTAAGGAACGCGACCTTAAGGCCGACCGCCTCGTAGCTAAAGGCAAAAATCGCGGATTCATTACCTACAACGATATTTTGAAGGAATTTCCCACGATTGAGGAGGACATTATGTTCCTTGACGAGCTGTACGCGAAATTCCAGACGGCGGGCATTGATGTGCTTGAAGGTGGTGGAATGCTTGAAAAAGAAGTGGCGGAACCACAGGGAAAGAAAAATATCTATCTCGGGAAAAGTAGCGATGCGTCCTACGATTCCATTCAGATGTACCTCAAGGAAATCGGCCAGTATCCGCTGATTAACGCAAAAGACGAAAAGGAACTTGCGAAACGCATTCAGGCTGGAGATATGGAAGCGAAGAACCTTCTCGCTCGCGCGAACCTGCGCCTTGTCGTTTCCATCGCCAAGAAATACGTCGGCCGTTCGCCCGACCTCACACTTCTCGACCTCATTCAGGAAGGAAACCTCGGTCTCTTCAAGGCGGTTGACAAATTTGACTGGACGAAGGGGTATAAGTTTTCAACCTACGCGACGTGGTGGATTCGCCAAGCGATTACCCGTGCGCTTGCCGACCAGTCCCGCACCATCCGCGTGCCCGTTCATATGGTGGAAACTATCGCGAAGTACAAACAGGTCGTCCGCCGTCTTTCTCAAGACCTCGGCCGCGACCCGCTTCCGGAAGAAATCGGGATTGAGATGGGGATAGAGACCGACAAAGTCTATCAGATAGAGAAGATTGACCAAGATACCGTTTCGCTTGAATCGCCCGTCGGTGATGAAGGTGATGACGGCAAGTCCACACTCGGAGATTTTTTACATGACGACAAAATATTGTCGCCCGACCAGGAATCATCCCGCCGAATCTTAGGCGACCAAGTGAAAGAAATACTCGGCGACCTTTCGGAAAAAGAGCGCAAGATTTTGGAACTCCGCCACGGGCTTCTTGATGGCGTCACCCATACGCTTGAAGAAGTAGGGCAGAAATTCGGCGTCACCCGCGAGCGCATCCGCCAGATTGAAGCGAAAGCGCACGAAAAAATCCGCCAGCACGAGAAGTCCAAGAAACTGCAGGGATATTAG
PROTEIN sequence
Length: 414
MEILAILTAMSKSKKTPSKKPVKAGKKKKVSAKKPSKKSAVARKVAPASPKMARGKERDLKADRLVAKGKNRGFITYNDILKEFPTIEEDIMFLDELYAKFQTAGIDVLEGGGMLEKEVAEPQGKKNIYLGKSSDASYDSIQMYLKEIGQYPLINAKDEKELAKRIQAGDMEAKNLLARANLRLVVSIAKKYVGRSPDLTLLDLIQEGNLGLFKAVDKFDWTKGYKFSTYATWWIRQAITRALADQSRTIRVPVHMVETIAKYKQVVRRLSQDLGRDPLPEEIGIEMGIETDKVYQIEKIDQDTVSLESPVGDEGDDGKSTLGDFLHDDKILSPDQESSRRILGDQVKEILGDLSEKERKILELRHGLLDGVTHTLEEVGQKFGVTRERIRQIEAKAHEKIRQHEKSKKLQGY*