ggKbase home page

gwa2_scaffold_10938_21

Organism: GWA2_OD1_47_8

partial RP 33 / 55 MC: 1 BSCG 34 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 16183..16902

Top 3 Functional Annotations

Value Algorithm Source
pseudouridylate synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPHIGHO2_01_FULL_OD1_47_10b_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 239.0
  • Bit_score: 477
  • Evalue 1.20e-131
pseudouridylate synthase KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 224.0
  • Bit_score: 191
  • Evalue 2.00e-46
Ribosomal large subunit pseudouridine synthase similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 193
  • Evalue 8.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_47_10b → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGCCAACCCCCCACTCTAACAAAAAGCCCATATCCATCCCCGTCATCTTTGAAGATAACCACGTGCTTGCGGTGTGTAAGCCCGCGGGCATGTTGAGCCAGGGCGATGCGTCAGGCGACGAAAACGTGCTTGATCGTATGAAGGAATATATCAGGCGAAAGTACAAAAAGCCCGGTAATGTTTTTTTGGGTTTGGTGCATCGGTTGGATCGAAATGTCGGGGGCGTGATGCTGTTGGCTCGGACATCAAAGGCAGCAGCGCGGCTATCAGTGCAATTCCATGATCGTACAATCCGTAAGTCGTACCTCGCTCGCGTCGAGGGGAAAATGCCTGAATCGCACGACGTACTCACGCATTACGTATTAAAAGACCCAGAAGAGAATAAAACAACAGTGTTTGATGCTGCTGCTGATGCTACTAGTGACGCGCGACCGGGAATAGCAGCGACCATTTCTTCCGCAGCAAAGCGCGCAACACTCGAGTACAAACTGATGCATTTTGACGGCCGCGACTCATTATTAGACATTTCATTATCGAGTGGGCGATCGCATCAGATACGAGCTCAACTTGCTCACATCGGCCATCCGATTATTGGCGATACAAAATATGGCTCAAAGGTAGCGAAAGGCGGACGGCTCGAGCTTGTGGCGCGAACCTTGACGTTCCAACATCCCACGACCAAGGAGATGATACAGGTGGAATGTGGTGAGGATCGCTAA
PROTEIN sequence
Length: 240
MPTPHSNKKPISIPVIFEDNHVLAVCKPAGMLSQGDASGDENVLDRMKEYIRRKYKKPGNVFLGLVHRLDRNVGGVMLLARTSKAAARLSVQFHDRTIRKSYLARVEGKMPESHDVLTHYVLKDPEENKTTVFDAAADATSDARPGIAATISSAAKRATLEYKLMHFDGRDSLLDISLSSGRSHQIRAQLAHIGHPIIGDTKYGSKVAKGGRLELVARTLTFQHPTTKEMIQVECGEDR*