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gwa2_scaffold_10145_12

Organism: GWA2_OD1_47_8b

partial RP 30 / 55 BSCG 37 / 51 ASCG 7 / 38
Location: 7778..8974

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKU94961.1}; TaxID=1618795 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_48_11b.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 398.0
  • Bit_score: 760
  • Evalue 1.20e-216
RpoD family RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 406.0
  • Bit_score: 389
  • Evalue 8.40e-106
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 392
  • Evalue 9.00e+00

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Taxonomy

Parcubacteria bacterium GW2011_GWA1_48_11b → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGAAAAAAACTAAGAAAGTTCACAAGGTTGCCAAGAAAATCCGCAAGTCGCGCCGCGCCAAAATCCGCGGGGTTAAAGTCGTCAAAGGAAAGCCAAAAAAGGCGCTCACCAAAAAAGAACAGAAACGCGAATTGGATCTCCAGGCGTTGCAGGAACTTATAGAGAGGGGCCGCGGCCGGGGTTTTGTTACCGACACGGAAGTTCTGCAGTATTTTCCCCACGTGGAGGAAGACATCAGCTTTCTGGAGGAAATTTACGACAAGCTTGAAGAATCAAACATTAAAGTTATTGAAACCAACCAGCTGATTGAACTTCCAAAAGAGGAAATCAGCGAGAAGGAATTGGAGGAGGCGACTCTTAGTGAGAATCTGCCGGATGCGGTACAGATGTATTTGAAAGAAATAGGGCGTACTCCGCTGCTCAACACCGAAGGCGAGAGGGAGTTGGCAAAACGCATTGAAAAAGGCGACCAGGAAGCCCGGCGCAAATTTATCCAGGCAAACTTGCGCCTCGTTGTTTCTATCGCCAAGCGCTACGTAAACCGCACGCCGAACTTGAGTATTCTGGATTTAATCCAGGAGGGGAACATCGGTTTGTCGCGCGCGGTGGATAAATTTGATTACCGCCGCGGTTTCAAGTTTTCAACTTACGCGACCTGGTGGATTCGCCAGGCGATTACCCGCGCGCTGGCCGACCAGTCGCGCACAATCCGCATTCCGGTGCATATGGTGGAGACCATTTCCAAATACACGCAAGCCAAGCGCCGCCTTTTGCAGGAATTGGGACGCGAGCCGCTGGCGGAGGAGATTGCCATTGAAATGAATATGCCGGTGGAAAAAATCCACCACATTCAAAAAATTTCCCAGGATGTGGTGTCGCTGGAGTCTCCAGTGGGGGACGAAGACGAGGATTCCACGCTGTCGGAATTTATTCCGGACGAGCGCAACCTGACGCCATCGCAAATCGCCTCGCAGACTTTGCTGCGCGATAAAATACAAGAGATTTTAGTTGACCTTACGCCACGCGAACAGAGGATTTTGAGTATGCGATTCGGGTTAGAGGACGGCGTGACCCACACTTTGGAAGAAGTAGGCAAGGAATTCGGCGTAACCCGTGAGCGCATTCGCCAAATTGAGGCAAAAGCCTTGGCCCGCATCAAGGGACACGAGAAATCCTTTACTTTAGAGGGATATTAA
PROTEIN sequence
Length: 399
MKKTKKVHKVAKKIRKSRRAKIRGVKVVKGKPKKALTKKEQKRELDLQALQELIERGRGRGFVTDTEVLQYFPHVEEDISFLEEIYDKLEESNIKVIETNQLIELPKEEISEKELEEATLSENLPDAVQMYLKEIGRTPLLNTEGERELAKRIEKGDQEARRKFIQANLRLVVSIAKRYVNRTPNLSILDLIQEGNIGLSRAVDKFDYRRGFKFSTYATWWIRQAITRALADQSRTIRIPVHMVETISKYTQAKRRLLQELGREPLAEEIAIEMNMPVEKIHHIQKISQDVVSLESPVGDEDEDSTLSEFIPDERNLTPSQIASQTLLRDKIQEILVDLTPREQRILSMRFGLEDGVTHTLEEVGKEFGVTRERIRQIEAKALARIKGHEKSFTLEGY*