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gwa2_scaffold_867_49

Organism: GWA2_OD1_44_13b

partial RP 38 / 55 BSCG 39 / 51 ASCG 8 / 38 MC: 1
Location: 41499..41984

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_44_16_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 161.0
  • Bit_score: 321
  • Evalue 9.60e-85
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 31.2
  • Coverage: 154.0
  • Bit_score: 82
  • Evalue 8.90e-14
RNA polymerase sigma factor SigX similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 87
  • Evalue 2.00e+00

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Taxonomy

R_OD1_Giovannonibacteria_44_16 → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGGAATTCATTAAGTCATATGACGCATACGCAGATGCCCTTTTCAGGCATTGCTATTTCAGGCTGTATGACAGGGAATTGGCCAAAGACCTGGTTCAGAGCACTTATATGAAGGTCTGGGAATATATTGCGTCCGGAAAGGAAGTGAAAAATATGCGGGCCTTTTTGTACAAAGTTGCTCACAACATGATAATTGATGAATTCAGAAAAAATAAAGGGCCTACGCTTTCCATAGATGAATTGAAAGAAAAAGGCATTGAACCGCAGGACGGATTGTTCGAAAAGCTGAAAAGCGGAGCGGAAGTAAAAAATTTGCTTGATATTTTTAATAAATTGGAGCCCGCGCACCGCGAGGTTGTGATAATGCGCTATGTTGATGAGCTTACACCGAAAGAGATAGCGGCAATTACAGGAGAGAGCGAGAACGTGATATCGGTAAGACTTCACCGGGCTATGGCACGGGCGAAAGAAATAATAATAAAATAA
PROTEIN sequence
Length: 162
MEFIKSYDAYADALFRHCYFRLYDRELAKDLVQSTYMKVWEYIASGKEVKNMRAFLYKVAHNMIIDEFRKNKGPTLSIDELKEKGIEPQDGLFEKLKSGAEVKNLLDIFNKLEPAHREVVIMRYVDELTPKEIAAITGESENVISVRLHRAMARAKEIIIK*