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gwf2_scaffold_1018_15

Organism: GWF2_TM6_38_10

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38
Location: comp(17487..19937)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKQ49531.1}; TaxID=1619084 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_38_10.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 816.0
  • Bit_score: 1571
  • Evalue 0.0
rpoD; RNA polymerase sigma factor RpoD KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 615.0
  • Bit_score: 692
  • Evalue 1.20e-196
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 440
  • Evalue 1.00e+00

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Taxonomy

GWF2_TM6_38_10 → TM6 → Bacteria

Sequences

DNA sequence
Length: 2451
ATGATTAGAAAAAAAAGCAAATCTGCCAATCCTAAAAAAAATACAGCTCAAGTAAAAGCAAAAAAGACAGTGCTAAAAAAAATACCTGCTATCGCTACACCAACAAAAAAATCAAGTATTAAAAAAGTACTCAAGTCAACAACAGCAAAAAAAATCGTAAAAAAGATTTCACAAAAAATAACCAAAAAAACTATAGCAAAAACAGTAATTAAAAAAAATGTACAAGCCGTAACCAAAATTGCCCCCAAAAAAACAACACCTTTGAAAAGTAAAACGCTCACCCAAAAAACAATTACAACAACGCTACAAAAAAAAGCACCCGCACCGCTAAAAAAAAACATTCCGGCAGCGGCAACAACTCGAGATAAAAAAATAATACAAAAAAAAGCATCACCACAAAAAACGATAACTCAAACAACAGAGATAAAAAAAATTATGACACCAAAAGCAACTGATAAAAAAAACAAACCAACATTGCACGAAGAAAAAACAAAAACAATAACAAAAGCAACTACAGTTGCAGAAGAACCCAAAGAAGAACTACTTGACGATGTTGAAGATGATGCTCTCATGGTGGAAAATGAACAAGAACACCCAACGGTTAATACACTTAAAAGCATCGAAAAACTCGTTGACGGACTTCTTGAAAAAGGCCGTAACGACGGTGTTATGACCTACGAAGAATTGCTTGCCTTCACAACCAAGCATAAACTCAGCGAGGAAGATTCCAACGAACTTTTACGCCTCATGGAAAAAGAAAATATAGATTTGATTTCGGCGGAAGAACTTGATGCTCTTCCGGGAAATTATAATCCTATTATGAGTATTACCGAAGGAGAAGCTGGACAAAATTTTGATCATTTAAAGACCAACCTAGAATCATCAATCGATACATTAGATTTGGCAAATGATCTTGATGAAGATGTGGAACTTGAAAAAATAAAAAGCCTTATAGAACCAAGCCAGCTAAACGATCCGGTTAAATTGTACCTCAAAGAAATTGGTAAAATACCCCTTTTGAATAAAACAACAGAAAAAGTTATCGCAGACAAAATAGCAATTGGCAAAAAAGAATCTATTGAATCTATCGCACAATTTCCCTTTGTTGCCAAAGAACTTATGAGTATGGAAGAACGTTTAAGCCGTGAACCACTCTTTTTAAAAGAGGTAATTCAGTTTTCTGACTTTGATGAAGACAATTCACCAAAATTTGAAGAAGAACGACAAAAGTTAATTACACAAATACAAAAAATAAAAAATCTTGTTTCAAATGAGGAAAAAATTTATCGCTCCTACCGCCAACTATTGAGCGATGCAAGCAAGAAAAAAGAGATGCTCGCCGTTGTTGAACACAATCGTAATCAAATTATTCAGGAAATTCAAACCATAAAATTATCAAATAAACAAATCAGAAAATTTGGTAAAAAAATTGAAAAAATTGCGGCCAAAATTCAAGAACGTAACGACGAAATAAAAGTTTGTGAAGAAAAATTATCATTTTATAAAGGACTTAAAAACCCACGCCCTGATGATCTTGAACAAATAAACAACCTTGAGACTACCATAAAAAATGGGCAAAAGATTATTAAAAAATCAGAATCTGAAACGGCACTTAACAAGGATAAAATTCTTAAGTTTTATCATCAACTTGTAGTTGCCCAACGCAAAGACAAAGAAGCAAAAGATGATTTAGCTCGAGCAAACTTACGTCTTGTTGTTAACATCGCTAAAAAATATATTAACCGTGGCCTTCATTTTCTTGACCTTATTCAAGAAGGTAATATCGGCCTTTTAAAAGCTGTAGAAAAATTTGAATTTGAACGTGGCTTTAAATTTTCAACCTATGCAACCTGGTGGATCAGACAAGCTATTACCCGTGCCATTGCTGACCAATCACGAACAATTCGTGTACCTGTTCACATGGTAGAAACATTGAGCAAAATTAACAAAATCACGCGTAACTACATCCAAGAAATTGGACGCGAACCAACCTATGCAGAACTTTCTAAAGAACTTAATCTTGATGAAAAAAAGATCAAAAATATCATCAAAATTTCTAAAGAGCCTGTCTCATTAGAAACACCAGTAGGCGATAGTGATGATACTTGTCTTAAAGACTTTATTGAAGATGAAAACGAATACTCACCAGTTGAAGCGGTGGTTAATGAAGACCTTAAAGAAAAAGTGCGCGAAATTCTTAAATCATTAACCCCACGCGAAGAAAAAGTTCTCAAAATGCGCTTTGGTATCGACGTTGCCTCAGAACATACCCTTGAAGAAGTAGGTAAAGATTTTGCCGTAACACGTGAACGTATTCGTCAGATTGAAGTAAAAGCATTACGCAAACTTCGCCATCCATCACGGGCAAAAAAGCTTCAAAACTTCTTTGAAAAAGAAATAGACAATGCAACAGCACATAACGAACCTGAACTTCCGGATGATTTTGACTAA
PROTEIN sequence
Length: 817
MIRKKSKSANPKKNTAQVKAKKTVLKKIPAIATPTKKSSIKKVLKSTTAKKIVKKISQKITKKTIAKTVIKKNVQAVTKIAPKKTTPLKSKTLTQKTITTTLQKKAPAPLKKNIPAAATTRDKKIIQKKASPQKTITQTTEIKKIMTPKATDKKNKPTLHEEKTKTITKATTVAEEPKEELLDDVEDDALMVENEQEHPTVNTLKSIEKLVDGLLEKGRNDGVMTYEELLAFTTKHKLSEEDSNELLRLMEKENIDLISAEELDALPGNYNPIMSITEGEAGQNFDHLKTNLESSIDTLDLANDLDEDVELEKIKSLIEPSQLNDPVKLYLKEIGKIPLLNKTTEKVIADKIAIGKKESIESIAQFPFVAKELMSMEERLSREPLFLKEVIQFSDFDEDNSPKFEEERQKLITQIQKIKNLVSNEEKIYRSYRQLLSDASKKKEMLAVVEHNRNQIIQEIQTIKLSNKQIRKFGKKIEKIAAKIQERNDEIKVCEEKLSFYKGLKNPRPDDLEQINNLETTIKNGQKIIKKSESETALNKDKILKFYHQLVVAQRKDKEAKDDLARANLRLVVNIAKKYINRGLHFLDLIQEGNIGLLKAVEKFEFERGFKFSTYATWWIRQAITRAIADQSRTIRVPVHMVETLSKINKITRNYIQEIGREPTYAELSKELNLDEKKIKNIIKISKEPVSLETPVGDSDDTCLKDFIEDENEYSPVEAVVNEDLKEKVREILKSLTPREEKVLKMRFGIDVASEHTLEEVGKDFAVTRERIRQIEVKALRKLRHPSRAKKLQNFFEKEIDNATAHNEPELPDDFD*