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gwa2_scaffold_924_1

Organism: GW2011_AR18

near complete RP 32 / 55 MC: 1 BSCG 15 / 51 ASCG 31 / 38 MC: 1
Location: comp(1..273)

Top 3 Functional Annotations

Value Algorithm Source
H/ACA ribonucleoprotein complex subunit 4 {ECO:0000313|EMBL:KHO54547.1}; EC=5.4.99.- {ECO:0000313|EMBL:KHO54547.1};; Flags: Fragment;; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 91.0
  • Bit_score: 186
  • Evalue 2.10e-44
Probable tRNA pseudouridine synthase B n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7I8_METSW similarity UNIREF
DB: UNIREF90
  • Identity: 57.0
  • Coverage: 0.0
  • Bit_score: 114
  • Evalue 1.00e+00
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 90.0
  • Bit_score: 114
  • Evalue 1.20e-23

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Taxonomy

archaeon GW2011_AR18 → Archaea

Sequences

DNA sequence
Length: 273
ATGGATGCTTTATTGAAGGCTGGTAAAGAATATATTTGTTTGATGCATATTCACTCTCCTGTTTCTGAATCTGAAATTCGAGAATCTGCTAATAAATTAATTGGAAAAATTACTCAATTACCTCCTTTGAAATCCGCTGTTAAGCGTGAATTTAGAGAACGTGAAGTTTATTATATGGAAATTTTAGAGATTAGAAAACAAGATGTTTTATTTATTATTGGCTGCCAGGCAGGAACATACGTGAGAAGATACTGTGATGATTTTGGAAAGATG
PROTEIN sequence
Length: 91
MDALLKAGKEYICLMHIHSPVSESEIRESANKLIGKITQLPPLKSAVKREFREREVYYMEILEIRKQDVLFIIGCQAGTYVRRYCDDFGKM