ggKbase home page

gwa2_scaffold_2235_10

Organism: GW2011_AR19

partial RP 38 / 55 MC: 7 BSCG 21 / 51 MC: 1 ASCG 23 / 38 MC: 2
Location: comp(6895..7560)

Top 3 Functional Annotations

Value Algorithm Source
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 Tax=AR19 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 221.0
  • Bit_score: 438
  • Evalue 5.70e-120
Probable exosome complex RNA-binding protein 1 n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PWR7_METTM similarity UNIREF
DB: UNIREF90
  • Identity: 38.0
  • Coverage: 0.0
  • Bit_score: 165
  • Evalue 2.00e+00
putative exosome complex RNA-binding protein 1 similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 222.0
  • Bit_score: 195
  • Evalue 1.30e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

AR19 → Pacearchaeaota → DPANN → Archaea

Sequences

DNA sequence
Length: 666
ATGACAGAACGAAAAGTAGTAATTCCTGGGGAAGCAATTGTAACTGGTGAAGACTATCTGCCCGGAAAAGGAACAGAAAAGAGAGGCAATGAAATTGTTGCAACTATGTTCGGATTAGCAGAAGAAATAAACAAACTTGTAAAAGTAATTCCCTTGTCAGGAGGATATGAACCAAGAAGAGGAAACGTTATAATCGGAAGAGTTGAAATGCTGACCCATAATGGCTGGGTAATGGATTTTGGAAATGCTGAAAACGCTTTTTTGTCTTTGATGGAAGTCCCAAGATTTGTTGATAAGGGAGCATTAGATGAAGTCATGGATATAGGCGACATGGTAGTTGTAAAAATTTATTCAATAAAAGGAAGAAGTATTGACGTGACAATCAAAGAGAGAGGGTTGGGAAAAATTGAAGAAGGAATAATTTTTAAAATAAATCCAAATAAAGTTCCAAGGGTTATTGGAAAAGAAGGAAGCATGATAAAAATAATTAAAGATGAAACCGGATGCAATATTACCGTCGGTCAAAATGGATTTATCTGGATAAAGGGCGATAAAATTGAAAATGAACTGCTTGCAAAAAAAGCAATCATATTTATTGTTGAAAAATCTTTTATTGAAGGTTTGACGGAAGAAGTTGAAAAATTTTTTAAGGGGGAGAAAAAATAA
PROTEIN sequence
Length: 222
MTERKVVIPGEAIVTGEDYLPGKGTEKRGNEIVATMFGLAEEINKLVKVIPLSGGYEPRRGNVIIGRVEMLTHNGWVMDFGNAENAFLSLMEVPRFVDKGALDEVMDIGDMVVVKIYSIKGRSIDVTIKERGLGKIEEGIIFKINPNKVPRVIGKEGSMIKIIKDETGCNITVGQNGFIWIKGDKIENELLAKKAIIFIVEKSFIEGLTEEVEKFFKGEKK*