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NECEvent2014_6_7_scaffold_3558_1

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(28..480)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=12 Tax=Enterobacteriaceae RepID=C1M9X3_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 150.0
  • Bit_score: 296
  • Evalue 1.70e-77
ribosome maturation protein RimP similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 150.0
  • Bit_score: 295
  • Evalue 1.10e-77
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 150.0
  • Bit_score: 295
  • Evalue 5.30e-77

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
TTGTCCACATTAGAGCAAAAATTAACAGAGATGATTACAGCGCCAGTTGAAGCCCTGGGCTACGAACTGGTCGGCATCGAATTTATTCGTGGTCGCACATCCACACTGCGCATCTATATTGATAGTGAAGATGGCATCAATGTTGATGATTGTGCTGATGTGAGCCATCAGGTAAGCGCCGTGATGGATGTCGAAGACCCAATCACCGTTGCCTATAACCTGGAAGTCTCCTCTCCGGGTCTCGACCGTCCTCTGTTCACAGCTGAACACTACGTGCGTTTCCTGGGTGAAGAAGTCACGCTGGTTCTTCGTATGGCGGTACAAAACCGTCGTAAATGGCAGGGCGTTATCAAAGCGGTGGACGGTGAGATGATCACGGTCACAGTCGAAGGCAAAGATGAAGTGTTCGCGCTGAGTAATATCCAGAAGGCGAACCTGGTTCCCCACTTTTAA
PROTEIN sequence
Length: 151
LSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVMDVEDPITVAYNLEVSSPGLDRPLFTAEHYVRFLGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF*