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ACD18_11_14

Organism: ACD18

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38
Location: comp(18816..22967)

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=857 to=868) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=86) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

weak hit to transporter Jill Banfield (11/15/12)

Taxonomy

RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated → Magasanikbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 4152
ATGAGTCGTTTTGTTTTAGAACAATTGAACAAAATAAAAGCCTTGGTAAGCAAAATTTTACCACAGAGATTATCCGGATATAACTATCAGGTGTTTTTTGTTTTTTTACTAGTAGTATTTTTTGCGTTATCTACCAAATATGTACATGCTGGATTTGTTGAATGGATAGTAGAAGCTATTTCTAGTATGTTATTAGGTCTTGCTACTGTCGCTATGGCTTTGACTATTTTTTTCTTACGTTATTTTATTACTCTTGCTAGTTACAACAATTATATAGATGTGAGTGTGGTGAAACTTGGTTGGGTGATGGTACGTGATGTGGCGAATATGTTTTTTGTTGTTTCACTTTTGGTCATTGCTTTTGCGACTATTCTAGGTGTTGAAAAATATGAATGGAAAAAAGGCTTGGTCAAATTGGTAATAATGGCGATACTTATCAATTTTAGTAATCTTATTGCTCAGATTATTATTGATGCTGCTCATATTTTTACTATTACTTTTTTGAATGCTGTATCTGCTAGTGCTGGTGGTAACTTGATGAACATGTTTAGTCTGGGTGAGATTACTAATATAATTACGGGTAAGAACATCGGAGACAGTATGCAATCAGCTACCTCTTCGATTTTCGTAGCTTCTTTCGTAGCTTTTTTGTTTGCTGTGGGTACAGCTGTAGTGATGGGTTCTTATGTTGTGGTTATGGCTTTACGTGTTGTTGTCTTGTGGGCTCTTATAATCTTGTCACCATTGGCTTATCTTATGTCTGCTTTGCCAAATGGAGAAAAATATTCTCAAAAGTGGTGGACGGAGTTCATGCAACATGTTATTGTCGCGCCTGTGATGGTCTTTTTCTTATGGTTGGCTTTTGCAACTTTGGGTACAGGGCAAATCATGAGTGAAATAAAACAAGGCAATACTATTCCTTTACAACAAAGTAGCGATGCTTTGTCTGTTTCTTTGACTAGTGTTTCTACTTGGGAAAATATGTCCAATTATATTTTGGCTCTTATCTTTTTGATGATTGGTTTGAAGATGACTAGAGAAAGTGGTGCAACTGGTGCTGGTATGTTGAATGCAGTAGAAGGTTATGCTAAGAAAGTTGCGACGATTGCTAGTGGTTATGCTGCGGGTAGATGGTTGGTGGGTAAGGGTGTTGAAAAAGGAAAGAAATTTGCGGGGGATTATGGAAAATTGACTTCAGCCGCAGTTATGGATACCAAAGCTGGAAAATTTGTCAAAAAATGGAGTGGTGCTCAGTGGTTAGGAAATGCGGGTATTAGAAGAGAAGCTGCTATAGATAGACTTGAGCAATACAAAAAAGAAAAAAAGAGAGAAATTATGGAAAGGGGTGGTGGTATTTCTGGTTGGTTAGCTCCTAGTTATGACAAAATAGCAAAACAAGAAGCTAAGGCTAATGCTGCTGCTGCTGAGGCCAAAGAAGATTATAGAGATTTACAAATAAAAGCTGAGCTTGATCTTTTTGGTGGTGATAAAGCAAAATTTGAAGAAAAACAAGGGAAACTTCTCAATGAAGCTACTGCCAAAAATATCGCAAAATTACAAAAAGAAGCCGATGAAGAAACTGACCCTGATGAAAAAGAAAAGAAGCGTAAAGAATTAGAAGCAGTAAAAAGAGATGTTGCTAATGCTGATAGTATTGAAGCAAAGGTAAAAATTTTGGAAAAAGAAGCCTATGAAGAAACTGACCCTGATGAAAAAGAAAAGAAACTTGCTGAAATCGCTAATCTAAAAGGTGAAAGAATTGAAACTTTGGCCAAGGCCTCTGGTTTGGGTGAGGGTGATGTTGTCGCTTTGGAACAAAAGGCTATGAGTGGTTTGTCTTATATGCGTCATCGTACCCAAGTCATGAAAAATGCTGATGCTGAAAATACTATGAAAGAAACTATAAATGAAACCTTCAGCAAAATGAATTTGGCTAGTTTATCAAGACAAAGAAATGAATTGGATAAAGCCAATGAAGAAGCTTTGGCTGAGTATATAAAAGGACAAATGGAAGGAATAGATGAATTCACTCAAGCAGAGATTTTACAGTTTGCAGAAGATTTTAGAAAAAATAAAATTTCTAAAAGGGTAAGTGAACTGGCTAAAGAAGAAAAAAAAGATCCAGAAAAATTGAGCGAAGTTGATCGTAATCGTTTAGAAGAAAAAGCTGTAAAAGAAATAGGAAGTCTTGATTTTTCGACGGCTGCTGGTAAGTTTTTTGAAGATAAGAGACAAAAAAAACAAACAAGAATAAATGCCTTAGTAAAGGAAGGCAACACTTTGGATAAAGCTACTGCAATAGCTACTGATGAACAAGAAAAAGAAAAAAATGAGAAACGAGAAGTAGTCATTAAAGAATTGACAAAAGATGGTAGTTCAGTAGAGGATGCTAAGGCTAAAATAAAACAAAAAGTTTTGAAACATTATAATAGTACTTTAGATTTTTCTAAAACAAAATATAGAGATGATTTAGCAAAAAAGAAAAAACAAGAGTTTGAAGATAAATTTGTTGCTGATGAACAAGAAAGAGTGAGGAAAGACGCCCTTGCAAAAATAGAAGATGAAGATAGTAAACGTTCAAAGAGTCAACGTCGCACACAATCTGAAAAAGAGGAATTAGCTCAAGAAGATGTACAAAAACATTTTTATGATAAGGAGGGAAAATTGTTAGATGAAAGAAAAAAAGAGATAGAAGACTATGCTTCTGCTGAAATGATAAAAGATGATGTAAAAAAAGAAATAACTGCTGAAGTGGATGTCCATTTCAAACCAAGAGAAGAAGCTATCCAAAAAGCACAAACAGAAAATGGTGATATTTCTGAAATTGTTACTGCAGATACCAAAGCAGCTTTGGTAGATAATATGTCAGATTACGAAAGAGCCAATGTCCTTGAGTCTGTCGTAAAAGATCCAAAACATAAATCTTGGACCAAGTTGCGCTCTTTTTATGCTACTAAATCTGCTTCTCGTAGTGCCAACAAATACAAAGGTGAAGAAGAAAAGTTGACCCTTCGTATGTCAGATGTTTTGCGTGGTTTGGAAGGTAAGACTATGGATGAAGAAAGAAATTATCAGAGATCAAAGATTGCTGATAGTATGAAAGAATTTCAAAATCTTACCTATGATGAAAGAATGGCAGAAATGAAAAGAAATGTAAAAGAAATCAAAAATTTGGGTGCAAAAGAAAAGCTAGGTACTTTGACTGCTCAAGAAAAAGATGTCTTGAAAAATGCTAGTCAAAGACAAGCTGCTGTATTATCAAGTATTATGGATCAAGGTGAGTTCAATGCTTTTGCTAATGAATTTAGACATTATATGGTAGAAGAATTGGGTGATGAATCATATGCAGGTCTAGAAAATAATATGCAAAATACTGCTACCTTAGCACTTGGTGCTCTTACTGGTATGGATAGAGGTGTCATTGATAGAGATATGTCAGGTGTTCAAGAAATTTTTCGAAAACGTCTAAAAGAAAAAGAAGGTGTGTTGATGAGAACTTTGCAACATGGTATGGAAAAATCTGCTAATAATGGTAATTCACATCATTATCATCAAGTAGTAGAAGGTGTAAATGCCAATGGTACAAAAGTAGTTGGCTTTACCAAAGCAATGGTTTCTGGTGTGGGTACTGGAAGTGGTAACAAAGGTAGTCTTGGTACTGGTGAAAATATTGATGGTTCACAAAAAATTATGGAAGATTATTTGAGTACGATGGCTGCCAACTTCAATCTTAGTACTTCAACTGATGGTCGTTCATTTATGGTTACCAATTCACAAGGTCATGCTGTTGATTTTCAACATGAAAGAGCTAGAGAATCTGTACTTAGTATTGCCAACTTGAGTTCACAAGCGATTAGTTCTATGGGAGATGTTAAGCTTAGATATTTGGCTGGTTCCAAAGGTTATGGTGCTTCTATATATGATAGAACTGATGGTAAATTGCATATGCCTTCAGGACGTATTAGTCAAACTTGGTCAAAAGTTTTGAGTGACATGACTAATAGTGCTCAAAATGGAGGCTCTGCTAATATTAGAGACAATGCTTTACGTTCACTTCGTGCTTTGTACAAGAGTTGGGGAGTCCCTGGTGCTGATACTATGTCGATACCAGCTCTTAGATCTTTGGCTAGTTCTTCAGGTTTTAAGATGTAG
PROTEIN sequence
Length: 1384
MSRFVLEQLNKIKALVSKILPQRLSGYNYQVFFVFLLVVFFALSTKYVHAGFVEWIVEAISSMLLGLATVAMALTIFFLRYFITLASYNNYIDVSVVKLGWVMVRDVANMFFVVSLLVIAFATILGVEKYEWKKGLVKLVIMAILINFSNLIAQIIIDAAHIFTITFLNAVSASAGGNLMNMFSLGEITNIITGKNIGDSMQSATSSIFVASFVAFLFAVGTAVVMGSYVVVMALRVVVLWALIILSPLAYLMSALPNGEKYSQKWWTEFMQHVIVAPVMVFFLWLAFATLGTGQIMSEIKQGNTIPLQQSSDALSVSLTSVSTWENMSNYILALIFLMIGLKMTRESGATGAGMLNAVEGYAKKVATIASGYAAGRWLVGKGVEKGKKFAGDYGKLTSAAVMDTKAGKFVKKWSGAQWLGNAGIRREAAIDRLEQYKKEKKREIMERGGGISGWLAPSYDKIAKQEAKANAAAAEAKEDYRDLQIKAELDLFGGDKAKFEEKQGKLLNEATAKNIAKLQKEADEETDPDEKEKKRKELEAVKRDVANADSIEAKVKILEKEAYEETDPDEKEKKLAEIANLKGERIETLAKASGLGEGDVVALEQKAMSGLSYMRHRTQVMKNADAENTMKETINETFSKMNLASLSRQRNELDKANEEALAEYIKGQMEGIDEFTQAEILQFAEDFRKNKISKRVSELAKEEKKDPEKLSEVDRNRLEEKAVKEIGSLDFSTAAGKFFEDKRQKKQTRINALVKEGNTLDKATAIATDEQEKEKNEKREVVIKELTKDGSSVEDAKAKIKQKVLKHYNSTLDFSKTKYRDDLAKKKKQEFEDKFVADEQERVRKDALAKIEDEDSKRSKSQRRTQSEKEELAQEDVQKHFYDKEGKLLDERKKEIEDYASAEMIKDDVKKEITAEVDVHFKPREEAIQKAQTENGDISEIVTADTKAALVDNMSDYERANVLESVVKDPKHKSWTKLRSFYATKSASRSANKYKGEEEKLTLRMSDVLRGLEGKTMDEERNYQRSKIADSMKEFQNLTYDERMAEMKRNVKEIKNLGAKEKLGTLTAQEKDVLKNASQRQAAVLSSIMDQGEFNAFANEFRHYMVEELGDESYAGLENNMQNTATLALGALTGMDRGVIDRDMSGVQEIFRKRLKEKEGVLMRTLQHGMEKSANNGNSHHYHQVVEGVNANGTKVVGFTKAMVSGVGTGSGNKGSLGTGENIDGSQKIMEDYLSTMAANFNLSTSTDGRSFMVTNSQGHAVDFQHERARESVLSIANLSSQAISSMGDVKLRYLAGSKGYGASIYDRTDGKLHMPSGRISQTWSKVLSDMTNSAQNGGSANIRDNALRSLRALYKSWGVPGADTMSIPALRSLASSSGFKM*