Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) | similarity |
KEGG
DB: KEGG |
47.1 | 999.99 | 1163 | 0.0 | dmg:GY50_0532 |
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) | rbh |
KEGG
DB: KEGG |
47.1 | 999.99 | 1163 | 0.0 | dmg:GY50_0532 |
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium acetobutylicum RepID=RPOC_CLOAB (db=UNIREF evalue=0.0 bit_score=1142.0 identity=48.66 coverage=88.2172915072686) | similarity |
UNIREF
DB: UNIREF |
48.66 | 88.22 | 1142 | 0.0 | dmg:GY50_0532 |
seg (db=Seg db_id=seg from=329 to=341) | iprscan |
interpro
DB: Seg |
null | null | null | null | dmg:GY50_0532 |
seg (db=Seg db_id=seg from=234 to=241) | iprscan |
interpro
DB: Seg |
null | null | null | null | dmg:GY50_0532 |
coiled-coil (db=Coil db_id=coil from=152 to=173 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | dmg:GY50_0532 |
coiled-coil (db=Coil db_id=coil from=186 to=214 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | dmg:GY50_0532 |
coiled-coil (db=Coil db_id=coil from=351 to=372 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | dmg:GY50_0532 |
seg (db=Seg db_id=seg from=145 to=167) | iprscan |
interpro
DB: Seg |
null | null | null | null | dmg:GY50_0532 |
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=8 to=1301 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 0.0 | dmg:GY50_0532 |
rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=13 to=1289 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 0.0 | dmg:GY50_0532 |
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=5 to=1284 evalue=0.0) | iprscan |
interpro
DB: superfamily |
null | null | null | 0.0 | dmg:GY50_0532 |
DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=8 to=1301 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 0.0 | dmg:GY50_0532 |
no description (db=HMMSmart db_id=SM00663 from=290 to=572 evalue=2.9e-160 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.90e-160 | dmg:GY50_0532 |
no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=10 to=403 evalue=1.4e-112 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.40e-112 | dmg:GY50_0532 |
RNA_pol_Rpb1_1 (db=HMMPfam db_id=PF04997 from=10 to=400 evalue=7.3e-90 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 7.30e-90 | dmg:GY50_0532 |
RNA_pol_Rpb1_5 (db=HMMPfam db_id=PF04998 from=804 to=1241 evalue=2.9e-60 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.90e-60 | dmg:GY50_0532 |
RNA_pol_Rpb1_2 (db=HMMPfam db_id=PF00623 from=402 to=543 evalue=1.4e-48 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.40e-48 | dmg:GY50_0532 |
no description (db=Gene3D db_id=G3DSA:2.40.40.30 from=404 to=546 evalue=8.6e-31 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 8.60e-31 | dmg:GY50_0532 |
RNA_pol_Rpb1_3 (db=HMMPfam db_id=PF04983 from=547 to=696 evalue=8.8e-22 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 8.80e-22 | dmg:GY50_0532 |
RNA_pol_Rpb1_4 (db=HMMPfam db_id=PF05000 from=727 to=789 evalue=4.6e-06 interpro_id=IPR007083 interpro_description=RNA polymerase Rpb1, domain 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.60e-06 | dmg:GY50_0532 |
RNApol_bact_RpoC (db=HAMAP db_id=MF_01322 from=9 to=1297 evalue=9.619 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 9.62e+00 | dmg:GY50_0532 |
dev:DhcVS_544 rpoC; DNA-directed RNA polymerase beta subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] alias=ACD18_12617.17542.22G0007,ACD18_12617.17542.22_7,ACD18_C00027G00007 id=13113 tax=ACD18 species=Clostridium acetobutylicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1, not OD1-i organism_desc= OD1 | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 2553 | 0.0 | dmg:GY50_0532 |
rpoC; DNA-directed RNA polymerase subunit beta; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated |
UNIPROT
DB: UniProtKB |
100.0 | 999.99 | 2553 | 0.0 | ggdbv1_90004089 |