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ACD18_30_17

Organism: ACD18

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38
Location: comp(23700..24188)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
Pili subunits (db=superfamily db_id=SSF54523 from=9 to=148 evalue=2.0e-14) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.00e-14
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=6 to=29 evalue=4.4e-06 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.40e-06

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Taxonomy

RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated → Magasanikbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGTTTTTCAAAAATAGTAAGGGCTTTACTTTGTATGAGTTGATTGTAGTTTTGGCTATTACTTCTATTATTGTTGCTGCAGCTGTTCCTGTTTATGGTAATTTTCAAGGTAAATTACAATTATTAGATAGTTCGGCTGATATTGTACAAATATTGAGGACTGCTAGAGGGCAGTCTCTTGTTGGTTATAATGATTCTGCACATGGTGTTTACTTTGTAATAAATAATAGTGGTGTTGATTCTTTTATTTTTTATCAAGGCGATTCTTATACTGCCAGAAATCAGGATTATGATCAAACTACTGAATTGAAAAGTGTTTTGGCTATTAGCAATAGTTCTTTTACACTTTCAAATAATAATATTGATATTAATTTTACAAAAGGTGGACTTGGTTTGCCAAATAATACTGGTTCACTAATTTTGTCTCATAGTATTACTGGTCAAAAAAATATTAGTGTCAATAGTTTTGGTATGGTTGAAAAAAATTAA
PROTEIN sequence
Length: 163
MFFKNSKGFTLYELIVVLAITSIIVAAAVPVYGNFQGKLQLLDSSADIVQILRTARGQSLVGYNDSAHGVYFVINNSGVDSFIFYQGDSYTARNQDYDQTTELKSVLAISNSSFTLSNNNIDINFTKGGLGLPNNTGSLILSHSITGQKNISVNSFGMVEKN*