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ACD18_178_7

Organism: ACD18

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38
Location: 2764..2952

Top 3 Functional Annotations

Value Algorithm Source
rpsE; 30S ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 56.0
  • Bit_score: 67
  • Evalue 1.50e-09
Ribosomal_S5 (db=HMMPfam db_id=PF00333 from=20 to=61 evalue=9.5e-15 interpro_id=IPR013810 interpro_description=Ribosomal protein S5, N-terminal GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.50e-15
30S RIBOSOMAL PROTEIN S5 (db=HMMPanther db_id=PTHR13718:SF2 from=3 to=62 evalue=1.4e-12) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.40e-12

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Notes

remove from concatenate phylogeny kelly wrighton (11/15/12)

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 189
ATGTCAAAACCTCAAGGTAATAATAGAAGACAAAAACCAAAAAAAGAAAAACCAGAATTTGATCAATCAATTGTGGATTTAGCACGTGTTACTCGTGTTACTAAAGGTGGAAAACATTTAAGTTTTCGTGCTTTGGTTTTGATTGGTGACCGTAAAGGTAGAGTAGGTTATGGTGTTGAAAAAGGTGCT
PROTEIN sequence
Length: 63
MSKPQGNNRRQKPKKEKPEFDQSIVDLARVTRVTKGGKHLSFRALVLIGDRKGRVGYGVEKGA