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ACD18_187_2

Organism: ACD18

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38
Location: 1184..2014

Top 3 Functional Annotations

Value Algorithm Source
degt/dnrj/eryc1/strs aminotransferase similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 201.0
  • Bit_score: 156
  • Evalue 8.30e-36
seg (db=Seg db_id=seg from=210 to=221) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
seg (db=Seg db_id=seg from=243 to=258) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Notes

N-acetyl-perosamine is found in the O-antigen of Gram-negative bacteria such as Vibrio cholarae O1, E. coli O157:H7 and Caulobacter crescentus CB15. The sugar is also found in perimycin, an antibiotic produced by the Gram-positive organism Streptomyces coelicolor var. aminophilus. Jill Banfield (11/15/12)

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 831
ATGATTTTTACCGGATTTCATCCTAACATTTATAAAAAAGACGTAAGTATTGCTTGCTCTTATTTACTTTTGCCTTGGAAGTGGTTTAGCTTGCGTGAAGGAAAAGATATCGTCAAAGTAGAGGAGCATCTACAAAACTATTTTCAAACCAAATACGCTATTACTTTTGATAGTGGGCGTACGGCTTTGCAAAAAACATTGGAAGCCTTGAATTTGAAACACGATGATGAAGTTTTGGTACAAGCTTATACTTGTATGGTGGTGAGTAATGCCATCAACTGGTCACATGCTAAAGCTGTTTATATTGACATCAATCAAGATTTCAACATGAATCCAGAAGATTTACAAAAAAAAATAACAAAAAAATCAAAAGTATTAATTATCCAACATACTTTTGGCAAACCAGCCGACTTGGAACAATTGTTAAAAATTGCTAAACAAAATAATCTAGTAATAATAGAAGATTGTGCTCATGCTTTTGGAGTTATGTATAAAGGTAAAAAACTTGGAACTTTTGGTCATATTGCTATGTTTAGTTTTGGTAGTGACAAAGTATTGTCTTCTTCTCGTGGTGGAGCTATCATTACCAACCATGAAAAATTGGCTGAAAAACTAATGGACATAAACAAAAAACTACCCAAGACAAAGTTATTAAAAATAAAACAAAACTTGTTGAACTTTCCCATATTTTATTTTGGCAAAAAAATGTATGATATCAAGATTGGAAAAATTTTGTTAGCTCTATCTAAAAAACTAAATCTATCAGCCAAAATAATGTACCAACAAGAAAAAGAGGGGAGAAGAGTGGACTTTTATCCAAGTAGATTCCCA
PROTEIN sequence
Length: 277
MIFTGFHPNIYKKDVSIACSYLLLPWKWFSLREGKDIVKVEEHLQNYFQTKYAITFDSGRTALQKTLEALNLKHDDEVLVQAYTCMVVSNAINWSHAKAVYIDINQDFNMNPEDLQKKITKKSKVLIIQHTFGKPADLEQLLKIAKQNNLVIIEDCAHAFGVMYKGKKLGTFGHIAMFSFGSDKVLSSSRGGAIITNHEKLAEKLMDINKKLPKTKLLKIKQNLLNFPIFYFGKKMYDIKIGKILLALSKKLNLSAKIMYQQEKEGRRVDFYPSRFP