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NECEvent2014_8_4_scaffold_3299_3

Organism: NECEvent2014_8_4_Streptococcus_mitis-rel_41_5_partial

partial RP 40 / 55 MC: 6 BSCG 39 / 51 MC: 2 ASCG 12 / 38 MC: 4
Location: comp(1335..1892)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase {ECO:0000256|RuleBase:RU003792}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; Flags: Fragment;; TaxID=1403937 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Stre similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 185.0
  • Bit_score: 371
  • Evalue 5.50e-100
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 185.0
  • Bit_score: 368
  • Evalue 9.30e-100
UPI0003D693B3 related cluster n=1 Tax=unknown RepID=UPI0003D693B3 similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 185.0
  • Bit_score: 371
  • Evalue 3.90e-100
  • rbh

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Taxonomy

Streptococcus sp. DORA_10 → Streptococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 558
TTTGACCTGCCCCATCAGATGGATGAGGAGAAGCTCCGTTTTGCTCTAGTCACTCAGTCACCTGAAGATATTGATGTGATTTCGATTGAGCTTGTGGCAGATGATTTTCATTGCCGTTATGCCAAGCACAGCAAGACCTATGAGTTTATTGTGGATAGGGGTCGTCCTAAAAATCCCATGCGCCGTCACTATGCTACTCACTTTCCCTACCCGCTTGACGTGGAACGCATGCAGATTGCAATCAAAAAGCTAGAGGGCACCCACGATTTCACAGGCTTTACAGCCTCTGGAACCAGTGTGGAGGATAAGGTTCGCACCATCACAGAAGCTAGTCTCAGGGTTGATGAGACAGGCCAGTTTTTGACTTTCACCTTTTCAGGAAATGGTTTCTTGTATAAACAGATTCGCAATATGGTGGGGACGCTGCTCAAAATCGGAAATAATCGTATGCCAGTAGAGCAGATTGACCTCATCTTGGAGAAAAAGGACAGGCAGCTTGCAGGTCCCACTGCAGCACCAAATGGTTTGTATTTAAAGGAGATTCGTTATGAAGAATAA
PROTEIN sequence
Length: 186
FDLPHQMDEEKLRFALVTQSPEDIDVISIELVADDFHCRYAKHSKTYEFIVDRGRPKNPMRRHYATHFPYPLDVERMQIAIKKLEGTHDFTGFTASGTSVEDKVRTITEASLRVDETGQFLTFTFSGNGFLYKQIRNMVGTLLKIGNNRMPVEQIDLILEKKDRQLAGPTAAPNGLYLKEIRYEE*