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NECEvent2014_7_1_scaffold_489_11

Organism: NECEvent2014_7_1_Escherichia_coli_51_198_partial

partial RP 25 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 11434..11646

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspA n=2143 Tax=Bacteria RepID=CSPA_ECO57 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 146
  • Evalue 1.00e-32
RNA chaperone/anti-terminator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 146
  • Evalue 2.80e-33
7.4 kDa cold shock protein {ECO:0000313|EMBL:EFJ79159.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 146
  • Evalue 1.40e-32

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGTCCGGTAAAATGACTGGTATCGTAAAATGGTTCAACGCTGACAAAGGCTTCGGCTTCATCACTCCTGACGATGGCTCTAAAGATGTGTTCGTACACTTCTCTGCTATCCAGAACGATGGTTACAAATCTCTGGACGAAGGTCAGAAAGTGTCCTTCACCATCGAAAGCGGCGCTAAAGGCCCGGCAGCTGGTAACGTAACCAGCCTGTAA
PROTEIN sequence
Length: 71
MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL*