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NECEvent2014_7_1_scaffold_1880_1

Organism: NECEvent2014_7_1_Escherichia_coli_51_198_partial

partial RP 25 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(3..755)

Top 3 Functional Annotations

Value Algorithm Source
Fimbrial usher protein n=1 Tax=Escherichia coli O9:H4 (strain HS) RepID=A8A4K1_ECOHS similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 251.0
  • Bit_score: 515
  • Evalue 2.90e-143
fimbrial usher protein similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 251.0
  • Bit_score: 515
  • Evalue 8.30e-144
Membrane protein YqiG {ECO:0000313|EMBL:AJE57613.1}; Strain O157 SvETEC scaffold12.1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ46559.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammapro similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 251.0
  • Bit_score: 513
  • Evalue 1.60e-142

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATCATCATTGGTTGTGCGTCAGCTTATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCATCTGGACCTGCAATGGGTATTAATTGATAACCAAACTGCAGTTTGTCTGACTCCAGAGCAATTAACATTATTAGGCTTTACTGATGAGATTATTGAAGAGGCTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGGATCATGGTATTGCTGGGGCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCACAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGATTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGAACAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATTAATGCAAAACTAACTATAGGTCAATACGAT
PROTEIN sequence
Length: 251
MYKKLKLTTISELIKNIYCSLSVIIIGCASAYAVEFNKDLIEAEDRENVNLSQFETDGQLPVGKYSLSTLINNKRTPIHLDLQWVLIDNQTAVCLTPEQLTLLGFTDEIIEEAQQNLIDGCYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPPELWDHGIAGAFLDYNLYASHYAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFNNGKSQANNLDFPRIYLFRPIPAINAKLTIGQYD