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NECEvent2014_4_5_scaffold_2334_3

Organism: NECEvent2014_4_5_Clostridium_perfringens_28_8

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 1864..2328

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=10 Tax=Clostridium perfringens RepID=H7CVU5_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 301
  • Evalue 4.10e-79
  • rbh
greA; transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 301
  • Evalue 1.20e-79
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 154.0
  • Bit_score: 301
  • Evalue 5.80e-79

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 465
ATGAATAATTATTTGACAGAGGAAAACGTTAGAAAGTTAAGAGAAGAATTAGACTATAGAATGTCTGTTGTTAGAGCAAAGATTGCAAAAGAGAAACTTGAGGCGGCAGCTCATGGTGATAGATCAGAAAACGCTGAGTATAAAGAAGCTTGTAGAAACTATAGAGAGAATGATAATAGAATACAATACCTTTTAACTATGATTTCCACAGCAATAATAGTTGATGAAGAAAGTAATGATAAATCTACACTAGGTCTTAACAGCAAAGCTAGAATTAAATTTGTTGAAGATGATGATGAGGATGTTGTTACTTTAGTTACAACTATGGATTTAGATTTAGAAAACATGTGTATAAGCATAGAATCAGATTTAGGAAAGGCCCTAATGGGTAAAAAGGTTGGGGATGTAGTAGAAGTTGAAGCTCCTGGTGGAAACTACACTGTAGAAGTATTAGAAATATTATAA
PROTEIN sequence
Length: 155
MNNYLTEENVRKLREELDYRMSVVRAKIAKEKLEAAAHGDRSENAEYKEACRNYRENDNRIQYLLTMISTAIIVDEESNDKSTLGLNSKARIKFVEDDDEDVVTLVTTMDLDLENMCISIESDLGKALMGKKVGDVVEVEAPGGNYTVEVLEIL*