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NECEvent2014_4_5_scaffold_1681_1

Organism: NECEvent2014_4_5_Clostridium_perfringens_28_8

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(1..597)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, alpha subunit domain protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVI2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 198.0
  • Bit_score: 131
  • Evalue 7.30e-28
RNA polymerase, alpha subunit domain protein {ECO:0000313|EMBL:EOR21058.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 198.0
  • Bit_score: 131
  • Evalue 1.00e-27
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 58.0
  • Bit_score: 63
  • Evalue 6.90e-08

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Taxonomy

Clostridium sartagoforme → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 597
ATGAATGAAGTAGCTATCAATGAGACAGATATAAAAGTATTGAATTTATCAGTTAGAGCATATAATTCCTTAAAAGCTGCTAATATAAATACTATTTTTGATTTAATACAATTAGAACCAGAAGATTTGATAAAAATAAAAAACTTAGGAGCTAAGACATTAAACGAAATTATTAATTTAAAAGATAGTATTAATAAAGGAGAGTATTTATATGGTAACTTAGAAGACGATATAGATTCTAGTTTAACAATGCTAGATTTTATAAAAGAAAAGAATAGGGAGATAAAAGAAATAATATTTTTCGATAATTTTGAAGGGTATGTTTATAATATTGAAGTAAAATCTATGAATTTATCTGTTAGATCTAAAAATGCTTTACTTAAGAATTCATTTGATAATTTGGTGAATTTGTTAGAAGTTGATATGGAAACATTTTACAAAATAAAGAACTTAGGAGATAAGAGTAAAAGAGAAATACTAGATGAAGTAAAAAGAGTTACTCATATTATTTATAGTGATAGTGAAGAAGAAGTTTTGAAAATTAATAATGATTTTAAATTTTTATTGAATGATTATGAAAATAGTTCTATGTCATAT
PROTEIN sequence
Length: 199
MNEVAINETDIKVLNLSVRAYNSLKAANINTIFDLIQLEPEDLIKIKNLGAKTLNEIINLKDSINKGEYLYGNLEDDIDSSLTMLDFIKEKNREIKEIIFFDNFEGYVYNIEVKSMNLSVRSKNALLKNSFDNLVNLLEVDMETFYKIKNLGDKSKREILDEVKRVTHIIYSDSEEEVLKINNDFKFLLNDYENSSMSY