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NECEvent2014_4_5_scaffold_1848_3

Organism: NECEvent2014_4_5_Clostridium_perfringens_28_8

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 2614..3189

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMX9_CLOPE similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 191.0
  • Bit_score: 376
  • Evalue 1.60e-101
  • rbh
sigV; RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 191.0
  • Bit_score: 376
  • Evalue 4.60e-102
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAB80265.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 191.0
  • Bit_score: 376
  • Evalue 2.30e-101

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 576
ATGGAAAAAACTATGAGTATATCATATCTAGATATAGATAGAAAAAATGAATTAAATGAAATTAGATTAATAAAAGAATCAATGAAAGGAAATAAAGAATCCTTTGGAATACTTATAAAAAACAATAAAGAATACTTATACAAAATGGCGTTTTTATATGTTAAAGATGAGCAAGATGCTCTTGAAGTTATACATGAAACCGTATATAGAGCCTTTTTAAATATTGAAAAATTAAAAAAAGCAAAGTTTTTTAACACATGGATTACAAGAATTTTAATAAATGTATCAATTGATTTTCTAAAGAAAAAAGGAAAAAATGAAATGTTGGATGAAAGTACACCGATAAGAAAAGAAAAATGTGAAATATCTACAGAGGAAAAGTTAGATTTATATAATGCAATAGATTTATTAAATGATAATTATAAAACAGTAATAATCATGATGTACTTTAATGATATGAAAATAAAAGATATCTCAAAGGTTATGGAAATTCCAGAAAACACAGTTAAAACTTATTTAAGAAGAGCAAAACAAGCTTTAGGTGAGGTTTTAAAGGAGGGCTATTTAAATGAATAA
PROTEIN sequence
Length: 192
MEKTMSISYLDIDRKNELNEIRLIKESMKGNKESFGILIKNNKEYLYKMAFLYVKDEQDALEVIHETVYRAFLNIEKLKKAKFFNTWITRILINVSIDFLKKKGKNEMLDESTPIRKEKCEISTEEKLDLYNAIDLLNDNYKTVIIMMYFNDMKIKDISKVMEIPENTVKTYLRRAKQALGEVLKEGYLNE*