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NECEvent2014_4_6_scaffold_4456_1

Organism: NECEvent2014_4_6_Clostridium_perfringens_30_4_hint

partial RP 5 / 55 BSCG 3 / 51 ASCG 3 / 38 MC: 1
Location: 3..722

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S1 family n=3 Tax=Clostridium perfringens RepID=Q0TNG2_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 239.0
  • Bit_score: 465
  • Evalue 3.30e-128
  • rbh
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 239.0
  • Bit_score: 465
  • Evalue 9.40e-129
Ribosomal protein S1 family {ECO:0000313|EMBL:EDT25274.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 239.0
  • Bit_score: 465
  • Evalue 4.70e-128

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 720
GCAGGAAGAAGAATAGAGAATTTAGAAGAATTAGTAGGAAAAACTTTAGAAGTTAGAGTTATAGAATTTAATAAAGAGAATAGAAAAGTTGTTGTTTCAAGAAGAGTAATAGATGAAGAAATAAGAAATAATGAAAAGAAAGCTCTTTGGTCTTCAATTAAAGAAGGAGAAAAAAGAAAGGGAAAAGTAACTAGATTAGCTAAGTTTGGTGCTTTTGTTGATATTGGTGGAGTAGAAGGATTAGTTCACTTAAGTGATATGTCATGGTCAAGAGTTCATAAGCCAGAAGAGGTTGTATCAGTTGGAGATGAAGTAGAAGTATTTGTATCAGAAGTGGATATGGATAGAGAGAGAATAGCACTTTCATTAAAAGATGTTATTAAAAATCCATGGGAAACATTAGAAGGATTAAAAGTTGGTGATGTTGTTTCAGGAAAAGTAACTAATTTTATAAAGGTTGGAGCTTTTGTTGAAGTGTTACCAGGAATAGAAGGATTAGTTCATATTTCAGAAATTACTGATGAAAATATAGCTAAGCCATCAGATATTTTAGAATTAGGCCAAGAAGTTAAGGTTAAAATCTTAAATATAGATGATGAAAACAAGAAAATGAGCTTAAGTATAAAAGATGCTGTAGAAACTTCAAATGAATATATGCAGTATAATGATGAAGAGGAAGGTTATTCATTAGCTGACTTATTCAAAGGATTAAATCTATAG
PROTEIN sequence
Length: 240
AGRRIENLEELVGKTLEVRVIEFNKENRKVVVSRRVIDEEIRNNEKKALWSSIKEGEKRKGKVTRLAKFGAFVDIGGVEGLVHLSDMSWSRVHKPEEVVSVGDEVEVFVSEVDMDRERIALSLKDVIKNPWETLEGLKVGDVVSGKVTNFIKVGAFVEVLPGIEGLVHISEITDENIAKPSDILELGQEVKVKILNIDDENKKMSLSIKDAVETSNEYMQYNDEEEGYSLADLFKGLNL*