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NECEvent2014_4_6_scaffold_1049_8

Organism: NECEvent2014_4_6_Clostridum_7_2_43FAA-rel_29_6_partial

partial RP 15 / 55 MC: 1 BSCG 13 / 51 ASCG 9 / 38 MC: 3
Location: comp(3419..3688)

Top 3 Functional Annotations

Value Algorithm Source
Putative holin n=1 Tax=Clostridium phage phiCD119 (strain Clostridium difficile/United States/Govind/2006) RepID=Q24LG4_BPPCD similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 85.0
  • Bit_score: 96
  • Evalue 1.50e-17
Putative membrane protein {ECO:0000313|EMBL:AIY79683.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 82.0
  • Bit_score: 115
  • Evalue 3.40e-23
holin similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 86.0
  • Bit_score: 94
  • Evalue 2.10e-17

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 270
TGTAAAATGGAAAATTTATTAACTTTTATACCAGAAAACTTATTAATATTAATTGCCGCTACTTATGTTGTAGGGGTATTTTTAAAGAAAATAGAAAAGATAAAGGACAATTATATAACAGTGATATTAATGGCCTTTACAATTGCCTTTAGCATGATTTTAGCTGGACGTACTGCAGCAGCCTTTTTACAAGGTATATTATGTTGGGGAGTTGCTGTAGGAATTAATCAAACTGGTAAACAAATAAGTAGGGTAAGTAAGGAGCAATAG
PROTEIN sequence
Length: 90
CKMENLLTFIPENLLILIAATYVVGVFLKKIEKIKDNYITVILMAFTIAFSMILAGRTAAAFLQGILCWGVAVGINQTGKQISRVSKEQ*