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NECEvent2014_4_6_scaffold_1436_1

Organism: NECEvent2014_4_6_Clostridum_7_2_43FAA-rel_29_6_partial

partial RP 15 / 55 MC: 1 BSCG 13 / 51 ASCG 9 / 38 MC: 3
Location: comp(2..436)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=457396 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 162.0
  • Bit_score: 233
  • Evalue 1.40e-58
Transcription termination factor Rho n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHD1_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 162.0
  • Bit_score: 235
  • Evalue 4.40e-59
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 162.0
  • Bit_score: 172
  • Evalue 7.70e-41

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 435
TTGAATAAGGAAAATTACGAGAAAAAAACTTTAATAGAGTTAAAAGAAATAGCAAAAGAACTTAACATAAAGAATATTAGTAAATTAAAGAAAAGTGAGCTTATAGAAGAGATATTAAATAACTCTCCTAAAAGTATAGAAAAGAATGGCGTTATATTACAAGAAAAAATAACTCCTAAGGTTAAAAATGAAGATAGTACAAATATTGTAAATGACAATAAAGAAGAATTTAGGGAAGAAAAGAGAGAAAGATTAAAGGTTATGATAAATGAATCTGATACTGCCATTGGAGTGTTGGAAATTTTAGAAAATAACAGTTTTGGATTTTTAAGATGTAACAATTATCAAACTGGTGAAAATGATATTTATGTATCCCCATCACAAATAAGAAGATTTAATTTAAGAACTGGAGACGAGGTCCAAGGAAAGGTTAGA
PROTEIN sequence
Length: 145
LNKENYEKKTLIELKEIAKELNIKNISKLKKSELIEEILNNSPKSIEKNGVILQEKITPKVKNEDSTNIVNDNKEEFREEKRERLKVMINESDTAIGVLEILENNSFGFLRCNNYQTGENDIYVSPSQIRRFNLRTGDEVQGKVR