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NECEvent2014_4_6_scaffold_2753_3

Organism: NECEvent2014_4_6_Clostridum_7_2_43FAA-rel_29_6_partial

partial RP 15 / 55 MC: 1 BSCG 13 / 51 ASCG 9 / 38 MC: 3
Location: comp(1185..1628)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C7B2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 147.0
  • Bit_score: 243
  • Evalue 1.70e-61
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EOR25207.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 147.0
  • Bit_score: 243
  • Evalue 2.30e-61
RNA polymerase sigma70 similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 152.0
  • Bit_score: 119
  • Evalue 6.00e-25

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Taxonomy

Clostridium sartagoforme → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 444
ATTAAGGTCAATAAGGAAAAACTATACAAGATATCTTATATCTATTTAAAAAATAAAGATGACGCTATGGATGTAATACATGAAAGTATAGTTAAAGCTTATAGGAAACTTGATAATATAAAAGACTTAAGTAATATTGATAAGTGGTTTATAAGACTTTTAATAAATACTTTAATAGATTATATAAGAAAAAATTCAAAGATGATATTAATGGAAGATAAAGACATGGAAGTATTAATTAATAAATCAAAGGAACAAGAAGACGGGTTTAGTTTATTAATTGAAAACTTAAATGAGGAATTGAGATTAATAATAATACTAAAGTATTTTCATGGGTATAAAATAAGTGAAATATCAGAGATATTAACGTTAAAGGAATCTCAAGTGAAGAATAAGATTCATAAAGCCTTAAATTTACTAAGAAAAGAAATTGAGGAGGAATAG
PROTEIN sequence
Length: 148
IKVNKEKLYKISYIYLKNKDDAMDVIHESIVKAYRKLDNIKDLSNIDKWFIRLLINTLIDYIRKNSKMILMEDKDMEVLINKSKEQEDGFSLLIENLNEELRLIIILKYFHGYKISEISEILTLKESQVKNKIHKALNLLRKEIEEE*