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NECEvent2014_4_6_scaffold_4357_2

Organism: NECEvent2014_4_6_Clostridum_7_2_43FAA-rel_29_6_partial

partial RP 15 / 55 MC: 1 BSCG 13 / 51 ASCG 9 / 38 MC: 3
Location: comp(774..1139)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLJ5_VEIPT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 244
  • Evalue 4.70e-62
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 244
  • Evalue 1.30e-62
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:EFG22317.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veill similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 244
  • Evalue 6.60e-62

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Taxonomy

Veillonella sp. 3_1_44 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 366
CGTGATGTATTCTGGACAGATCGTGAGCATGATACCATCACGTGGGAAGACATAAAAAAATGTCCTCTATCCCTTTCTGGTGGCTCTGTTCGAATGATTATGCAGTCTAGCTTAACAGATATGGAGCAACTTAATGCGGTAGCTATAACTACAACAAAAAGCTCAGCTATTGAGTGGGCCTCTTCTGGTCGTACAGTTTCTTTAGTCCCAATGGACGCTAAGGAACTTATTAATCATCGCAAAATGGCCCGCATCAAATTGCCAGAATTCTCGGGGGATTTCAAAAAAGCTTTTATCACACTTAAAGGCCATGCACTTTCCCCAGTAGCACAGCAATTTATTGACTTTTACAAAGCCTATGTATAA
PROTEIN sequence
Length: 122
RDVFWTDREHDTITWEDIKKCPLSLSGGSVRMIMQSSLTDMEQLNAVAITTTKSSAIEWASSGRTVSLVPMDAKELINHRKMARIKLPEFSGDFKKAFITLKGHALSPVAQQFIDFYKAYV*