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NECEvent2014_5_2_scaffold_467_10

Organism: NECEvent2014_5_2_Propionibacterium_HGH0353-rel_63_29

near complete RP 51 / 55 MC: 6 BSCG 48 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 7909..8514

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WTL9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 386
  • Evalue 1.30e-104
  • rbh
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPH01241.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 386
  • Evalue 1.80e-104
sigma-70 region 2 similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 191.0
  • Bit_score: 368
  • Evalue 1.30e-99

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 606
TTGTCCTCGACCGCTGCTAGCGTCGAATCCATGGTCAGAGGGGTCGAAGGTGACGACGGCGACGAGATCGTTTTTGCAGACATAAGTGCTGCTCAGGACGGAGATGCTGCGGCATACGCTCGCGTTGTTGAGTCATGGGGCGGGCCGCTCCTGAGGTTCTGTCACAACCACTTGCCGGCCACGATTGACGCGGAGGACGTCGTCCAGGACGTTTTGCTGACCGCCTGGCAGAAGCTGCCCGATCTCGACGATAGGTCCCGGTTCAGGGCGTGGATGTACACCATTGCTCGGAATCGTTGCCGGGAAGTCATCCGGACCGCCGGGCGACGCGCAACCGATCCGGTAGCTCCTGACGACGTTCCGGTGAGGATCGACACCCTTCAGGACCCAGCAAGGGCACACACCAGGGATGCCGCGATGAAGGCGTTGAGGAAGAGTGTTGTCCGGCTGCCGGACAACCAGAGGCGTATCTGGGCCATGGCTCAGATCGACGGTCTCGGATACGCCGAGATTGCTGAGATTGAAGAATTACCGGTGTCCACCGTTCGTGGCCGTTTGGCCCGGGCGAGGGCCACCATTGCGGAGGAGATGGAACCATGGAGGTGA
PROTEIN sequence
Length: 202
LSSTAASVESMVRGVEGDDGDEIVFADISAAQDGDAAAYARVVESWGGPLLRFCHNHLPATIDAEDVVQDVLLTAWQKLPDLDDRSRFRAWMYTIARNRCREVIRTAGRRATDPVAPDDVPVRIDTLQDPARAHTRDAAMKALRKSVVRLPDNQRRIWAMAQIDGLGYAEIAEIEELPVSTVRGRLARARATIAEEMEPWR*