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NECEvent2014_5_2_scaffold_554_3

Organism: NECEvent2014_5_2_Propionibacterium_HGH0353-rel_63_29

near complete RP 51 / 55 MC: 6 BSCG 48 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(3102..4340)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease D n=1 Tax=Propionibacterium sp. HGH0353 RepID=S3WXR5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 412.0
  • Bit_score: 850
  • Evalue 8.30e-244
  • rbh
Ribonuclease D {ECO:0000313|EMBL:EPH01872.1}; TaxID=1203571 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. HGH0353.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 412.0
  • Bit_score: 848
  • Evalue 3.40e-243
3'-5' exonuclease similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 412.0
  • Bit_score: 815
  • Evalue 6.40e-234

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Taxonomy

Propionibacterium sp. HGH0353 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
GTGAGCGATTTCCCCGTCCTTGCAGAGCCTCGGGAAGGAGTGCCGCCAGTCGTCGCTTCTCCCGAGGCTCTTCGCCGCACGTGCCAGGCACTTCAGAACGGCTACGGTCCCGTCGCGATTGACACCGAGCGGGCCCATGGTTTCCGTTACAACCCGCGCGCCTACCTCATCCAGTTGCGCCGTGAGGGGGCTGGCACTCACCTCGTCGATCCCGTCGCTCTCGGCGAGACGGAGGGTTTGAAGCCGCTTGCCGATGCCCTCGCCGGGACACAGTGGATCCTCCATGCCGCCGCCCAGGACATGCCATGCCTGGCGATGGACGGTCTTCGTCCTGACGACCTGTTCGACACCGAGTTGGCTGGACGCCTTCTCAGCCTTCCTCGCGTCGGCCTGGGATCGATGGTCGAGCACTACTGCGGGGTGACCCTTCTCAAGGAGCACTCCGCCTCGGACTGGTCTCGACGTCCCCTCCCCCATGACTGGCTCGTCTACGCAGCTCTGGATGTCGAGCTCCTCAACGACGTGCGAGAAAAGGTCATCGCCGACCTCCGAGAGGCTGGAAAGGACGAATGGGCTCGTCAGGAGTTCGCCCACCTCGTCACGGTGGCCGCTGGACTCCCCAGCGAAGAACCGGGTGTCGACGCATCCCGTTGGCGCCGGATCAGCCACATCGGTGACATTCGCAGCAGAGCTGGGCTGCAACTGGCGCATGACCTGTGGCTGGCGCGCGAGAACCTCGCCCACGACCTCGACATTGCTCCGGGCAGGCTGTTGCGTGACGAGGCCCTCGTCGCAGCCGCAAAGCACTGCGACCGCACCGTCAACGTCGATGTCGAGAAAATCCTGTCCGTCAAGGGGTTCCATCGCGGCCAGGCCATGAAATATCACCAGACTTGGGTCGACGCCATCGACCACGCCCGTGGCGTCTCGCCGAAGAAGTACCCGCCATTTCGCGAATACTCCTCAGCGATCCCCCACCCCCGCTCCTGGGAGCGTCACCATCCGGAGGAGGCTGCCCGCTGGGCGGCCGTCAGACCGGCCGTCAATGAGATGGCTGCTGACCATGACGTCCCACCGGAAAACCTCTGTACCCCGGCATGGTTGCGGCAATTCGCATGGCAGCCACCGCACGACCTCTCCGTCGCGGGGGTCGATGCGTTCTTCGCAGATTTGGGTGCCCGTCCGTGGCAGCGAGGGATCCTCGCGAGTCTGCTCAGCGAGGTCATGGCCCAGCTGTGA
PROTEIN sequence
Length: 413
VSDFPVLAEPREGVPPVVASPEALRRTCQALQNGYGPVAIDTERAHGFRYNPRAYLIQLRREGAGTHLVDPVALGETEGLKPLADALAGTQWILHAAAQDMPCLAMDGLRPDDLFDTELAGRLLSLPRVGLGSMVEHYCGVTLLKEHSASDWSRRPLPHDWLVYAALDVELLNDVREKVIADLREAGKDEWARQEFAHLVTVAAGLPSEEPGVDASRWRRISHIGDIRSRAGLQLAHDLWLARENLAHDLDIAPGRLLRDEALVAAAKHCDRTVNVDVEKILSVKGFHRGQAMKYHQTWVDAIDHARGVSPKKYPPFREYSSAIPHPRSWERHHPEEAARWAAVRPAVNEMAADHDVPPENLCTPAWLRQFAWQPPHDLSVAGVDAFFADLGARPWQRGILASLLSEVMAQL*