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NECEvent2014_5_2_scaffold_5436_1

Organism: NECEvent2014_5_2_Propionibacterium_HGH0353-rel_63_29

near complete RP 51 / 55 MC: 6 BSCG 48 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2..1252

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1203576 species="Bacteria; A similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 417.0
  • Bit_score: 824
  • Evalue 6.90e-236
Transcription-repair-coupling factor n=1 Tax=Propionibacterium avidum 44067 RepID=M9VF31_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 417.0
  • Bit_score: 826
  • Evalue 1.70e-236
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 417.0
  • Bit_score: 826
  • Evalue 4.80e-237

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Taxonomy

Propionibacterium sp. KPL1852 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1251
GAAACCCACCAGGAGCTCATCTGCGCTCCGTGTCGTGAGCTCACCCTCACCGACGAGGTCCGATCCAGGGCCAGGACCCTGTTACCGGACCACCCCGAACTGGCGGACATGCTGGAACGAATCGCCGATGGTCAGGCTGTCGAGGGGATGGAAGCCCTCATGCCAGCCCTGGTCGACGAGATGGAGCTGCTCGTCGACGTCCTTCCCGAGCACGCCATGGTCATCCTCTCGGACCCCGAGATGGTGCGCTCCCGGGCAGCAGACCTGGTCCGCACCTCCGAAGAATTCCTGGGAGCCGGGTGGGCGGCTGCCGCCGGTGGTGGTCAGGCCCCGATCGACCTGGCGGCCTCGGGATACCGCAGCCTGGCCCATGTGAGGGCCCACTGCCTCGAGCGCGGCATGGCGTGGTGGTCGATGTCCTCCTTCGCCCTGGACGCCCCTGCCACGGATGCCCTTGCCGACGACGACGTCACGACCGCCCCGCGCACCGTCAACCCGCATCTGGAGGCCGTCGAACCGTGGCGCGGAGACGTGGAGGCGGCCGTCGAGGATCTCACCACCAGACTCGGTGAGGGCTGGACGGTCGTGCTGTGTGCCGAGGGTGAGGGCATCGCCAAGCGCATGGCGGAGCTGCTCGGTGAACATCACGTCGCGGCCAAGCTGGTCGACGAGGTCGACGCCGACATCACCGAGCCATGCGTCCAGGTCGTCCGGCTGCATCAGCGTCATGGTTTCGCCGCGGATTCCCTCAAACTGTTGGTGGCTTCCACCGGAGACCTCGCTGACTCCCAGGACCCAGCCGTCAGTGGCGAGCGGCGCATGCCCCGACGCCGTCGCAATCAGATCCAGCCGCTTGAGCTCAAGTCCGGCGACCTCGTCGTCCATGAGCAGCACGGTGTGGGCCGATACGTGGAGATGGTGCAGCGCACCGTGGGTGGGGCCACCCGCGAGTATCTCGTCATCGAGTACGCCCCCTCCAAGAAGGGTCAGCCCGGCGACCGTCTCTTCGTCCCCGTCAACTCTCTGGACCAGGTGACCCGCTATGTCGGTGGTGATGCTCCCAGTCTGGACCGGATGGGTGGCGCCGACTGGCGCAAGCGCAAGTCTCGTGCCCGCAAGGCAGTCCGTGAGATCGCCGCTGAACTCATCAAGCTCTATGCCGCCCGGCAGGCCACCAAGGGCCACGCCTTCGGCCCCGACACCGCCTGGCAGCGGGAGCTGGAGGACGCCTTCGCCTACGTCGAGACCCCT
PROTEIN sequence
Length: 417
ETHQELICAPCRELTLTDEVRSRARTLLPDHPELADMLERIADGQAVEGMEALMPALVDEMELLVDVLPEHAMVILSDPEMVRSRAADLVRTSEEFLGAGWAAAAGGGQAPIDLAASGYRSLAHVRAHCLERGMAWWSMSSFALDAPATDALADDDVTTAPRTVNPHLEAVEPWRGDVEAAVEDLTTRLGEGWTVVLCAEGEGIAKRMAELLGEHHVAAKLVDEVDADITEPCVQVVRLHQRHGFAADSLKLLVASTGDLADSQDPAVSGERRMPRRRRNQIQPLELKSGDLVVHEQHGVGRYVEMVQRTVGGATREYLVIEYAPSKKGQPGDRLFVPVNSLDQVTRYVGGDAPSLDRMGGADWRKRKSRARKAVREIAAELIKLYAARQATKGHAFGPDTAWQRELEDAFAYVETP