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NECEvent2014_5_5_scaffold_5_22

Organism: NECEvent2014_5_5_Enterobacteriales_53_83_partial

partial RP 24 / 55 MC: 1 BSCG 19 / 51 ASCG 7 / 38 MC: 1
Location: comp(19369..22815)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1235834 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 999.99
  • Bit_score: 2152
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Enterobacter cloacae RepID=UPI0002F86873 similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 999.99
  • Bit_score: 2152
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 999.99
  • Bit_score: 2152
  • Evalue 0.0

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Taxonomy

Kosakonia sacchari → Kosakonia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3447
ATGCCTGAACAATACCGTTATTCTCTGCCCGCCAAAGCTGGCGAGCAGCGCCAGCTTGGCGAACTGACTGGCGCAGCCTGCGCCACCGAAGTCGCGGAAATCATTGAGCGCCATAAAGGTCCGGTGGTATTGATTGCGCCGGATATGCAAAATGCCCTGCGTCTGCATGACGAAATTACCCAGTTTACCGACAACCTGGTGATGAATCTTGCTGACTGGGAGACACTGCCGTATGACAGTTTCTCGCCGCATCAGGAAATTATCTCCTCCCGTCTCTCCACGCTCTACCAGTTGCCCTCTATGCAACGTGGTGTGCTGATTGTAGCGGTGAATACCTTGATGCAGCGCGTCTGCCCGCATAGCTATTTGCACGGTCACGCATTGGTCATGAAAAAAGGTCAGCGTCTGTCCCGTGACGCGCTGCGCGCACAACTGGACAGCGCAGGGTATCGCCACGTTGATCAGGTTATGGAGCACGGCGAGTACGCGACTCGCGGGGCGCTACTGGATCTCTTCCCGATGGGCAGCGCACAACCTTATCGCCTTGATTTCTTTGATGATGAAATTGACAGTCTTCGCCTGTTCGATGCGGACAGCCAGCGTACGCTGGAAGAGGTTGAAGCCATCAATTTACTGCCTGCTCACGAATTCCCGACGGATAAGACCGCCATCGAACTGTTTCGCAGCCAGTGGCGAGATAAGTTTGACGTCAAGCGCGATGCCGAACATATCTATCAACAGGTGAGCAAAGGCACTTTGCCAACCGGCATTGAATACTGGCAGCCACTGTTTTTCAGTGAGCCTTTGCCGTCGTTGTTTAGCTATTTGCCGGACAATACGCTACTGGTGAACACGGGTGACCTTGAAAACAGCGCTGAGCGCTTTAGCCAGGAGACCCAGGCGCGCTTCGAAAACCGCGGCGTGGACCCAATGCGCCCTTTGCTGGCGCCGGAATTACTGTGGCTGCGGGTTGATGAACTGTTCAGCGAACTCAAGCGCTGGCCGCGCGTGCAGCTCAAAACCGAAAGCCTGGCAGACAAAACCGCCAATGTGAACCTCGGTTACCGGACGTTGCCGGATCTGGCCGTTCAGGCACAGCAAAAGTCGCCGCTGGATAATTTGCGCAAATTCCTCGAATCCTTTACCGGTCCGGTCGTCTTTTCGGTTGAGAGCGAGGGGCGTCGCGAAGCGCTGGGAGAACTCCTCTCACGCATCAAAGTGGCGCCGAAGCGCATTACCCGGCTGGATGACGCGCAAGATACAGGGCGCTATCTGATCATTGGCTCCGCAGAACATGGCTTTATCGACACGCTACGTAACCGGGCGCTGATTTGCGAAAGCGATCTGCTGGGCGAGCGCGTTGCCCGCCGTCGCCAGGATACACGCCGCACGATTAACCCCGATACGCTGATCCGCAACCTTGCTGAACTGCACCCTGGCCAGCCGGTGGTGCATCTGGAACATGGGGTTGGACGCTATGCGGGAATGACCACGCTTGAAGCGGGCGGCATAAAAGGCGAATACCTGATGCTGACCTATGCCGGGGATGCCAAACTGTACGTGCCGGTCTCGTCGTTGCATCTGATTAGCCGCTATGCCGGGGGTGCCGAGGAGAACGCGCCGCTGCATAAACTGGGCGGCGATGCATGGGCCCGCGCGCGGCAGAAAGCGGCAGAAAAAGTCCGGGATGTGGCGGCGGAATTGCTGGATATCTATGCCCAACGCGCCGCGAAGTCCGGCTTTGCATTTAAACACGATCGCGAACAATATCAGCTTTTCTGCGACAGCTTCCCGTTTGAAACCACGCCAGACCAGGCGCAAGCCATTAATGCGGTGTTAAGTGACATGTGCCAGCCACTGGCCATGGACCGCCTGGTGTGTGGCGATGTCGGCTTCGGTAAAACCGAAGTGGCAATGCGTGCCGCCTTCCTCGCCGTCGAAAACAACAAGCAGGTAGCCGTGCTGGTGCCCACCACCCTGCTCGCCCAGCAGCATTTCGACAACTTCCGCGATCGCTTCGCCAACTGGCCGGTGCGGGTGGAGATGCTCTCACGTTTTCGTAGCGCGAAAGAACAGACACAAGTGCTGGAGCAGGCGGCTGAGGGCAAGATTGATATTCTTATCGGCACCCATAAGCTGCTGCAAAACGATGTGAAGTGGAAAGATCTGGGGCTGCTGATCGTCGATGAAGAACACCGCTTCGGCGTGCGTCATAAAGAGCGTATTAAAGCGATGCGTGCCGACGTAGATATCCTCACGCTAACCGCAACACCCATTCCGCGTACACTCAATATGGCCATGAGCGGTATGCGCGATCTGTCGATCATTGCCACCCCGCCTGCGCGCCGTCTGGCAGTAAAAACCTTCGTTCGCGAATACGACAGTCTGGTAGTGCGCGAGGCAATACTGCGCGAAGTCCTGCGTGGTGGGCAGGTTTACTACCTTTATAACGATGTCGAAAATATTCAGAAAGCCGCCGACAGACTGGCGGAACTGGTTCCGGAAGCGCGCATCGCCATCGGCCACGGGCAGATGCGTGAGCGCGAACTGGAACGGGTAATGAATGATTTCCACCACCAGCGTTTTAATGTGCTGGTGTGTACCACGATAATCGAGACCGGGATCGACATTCCTACTGCGAACACAATCATTATTGAACGTGCCGATCACTTTGGCCTGGCGCAGCTCCACCAGTTACGTGGCCGCGTGGGACGTTCGCACCATCAGGCCTATGCCTGGCTGCTGACGCCGCATCCGAAAGCGATGACCACCGATGCGCAAAAGCGTCTCGAAGCGATTGCCTCGCTGGAAGATTTAGGGGCGGGTTTCGCGTTGGCGACCCACGATCTGGAAATCCGTGGGGCTGGCGAACTGTTGGGCGAAGATCAGAGCGGTTCAATGGAGACCATCGGCTTTTCACTGTATATGGAGCTGCTGGAAAATGCGGTCGATGCGCTCAAAGCCGGGCGAGAGCCATCGCTCGAAGATCTCACCAGCCAGCAAACAGAAGTCGAACTGCGCATGCCTTCCCTGCTGCCGGATGATTTTATTCCCGACGTTAATACTCGTCTCTCTTTCTACAAGCGCATTGCCAGTGCGAAGAGTGAAAATGAGCTCGATGAAATTAAAGTGGAACTGATCGACCGTTTTGGTCTGCTGCCTGACGCCGCGCGAAACCTGCTTGATATTGCGCGGCTGCGTCAACAGGCCCAGAAATTGGGGATTCGTAAGCTTGAAGGGAATGAAAAAGGCGGCACGATTGAGTTCAATGAAAAAAACCATGTCAATCCCGCATGGCTTATCGGCCTGCTGCAAAAGCAGCCTAAACATTTCCGCCTCGATGGCCCGACACGCCTGAAGTTCTTCCAGGAGCTGACGGAACGCAAAACCCGCATGGAGTGGGTACGCAACTTCATGCAGCAGCTTGAAGAAAACGCGATGGCATAG
PROTEIN sequence
Length: 1149
MPEQYRYSLPAKAGEQRQLGELTGAACATEVAEIIERHKGPVVLIAPDMQNALRLHDEITQFTDNLVMNLADWETLPYDSFSPHQEIISSRLSTLYQLPSMQRGVLIVAVNTLMQRVCPHSYLHGHALVMKKGQRLSRDALRAQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSAQPYRLDFFDDEIDSLRLFDADSQRTLEEVEAINLLPAHEFPTDKTAIELFRSQWRDKFDVKRDAEHIYQQVSKGTLPTGIEYWQPLFFSEPLPSLFSYLPDNTLLVNTGDLENSAERFSQETQARFENRGVDPMRPLLAPELLWLRVDELFSELKRWPRVQLKTESLADKTANVNLGYRTLPDLAVQAQQKSPLDNLRKFLESFTGPVVFSVESEGRREALGELLSRIKVAPKRITRLDDAQDTGRYLIIGSAEHGFIDTLRNRALICESDLLGERVARRRQDTRRTINPDTLIRNLAELHPGQPVVHLEHGVGRYAGMTTLEAGGIKGEYLMLTYAGDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWARARQKAAEKVRDVAAELLDIYAQRAAKSGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENNKQVAVLVPTTLLAQQHFDNFRDRFANWPVRVEMLSRFRSAKEQTQVLEQAAEGKIDILIGTHKLLQNDVKWKDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREVLRGGQVYYLYNDVENIQKAADRLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKSENELDEIKVELIDRFGLLPDAARNLLDIARLRQQAQKLGIRKLEGNEKGGTIEFNEKNHVNPAWLIGLLQKQPKHFRLDGPTRLKFFQELTERKTRMEWVRNFMQQLEENAMA*