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NECEvent2014_5_5_scaffold_32_18

Organism: NECEvent2014_5_5_Enterobacteriales_53_83_partial

partial RP 24 / 55 MC: 1 BSCG 19 / 51 ASCG 7 / 38 MC: 1
Location: comp(17748..18296)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=7 Tax=Enterobacteriaceae RepID=I6HF19_SHIFL similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 182.0
  • Bit_score: 329
  • Evalue 1.70e-87
  • rbh
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 182.0
  • Bit_score: 331
  • Evalue 1.60e-88
DNA-binding protein {ECO:0000313|EMBL:AHY11280.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 182.0
  • Bit_score: 331
  • Evalue 8.00e-88

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGACACAGCCTATTAGCGTGATCGCCAAAAGTCTGGTGCGAGAACGTCTGCGAACCGGGCTTTCACTGGCGGAAATTGCCCGCCGTGCCGGAATTGCCAAATCCACACTTTCCCAGCTTGAGGCCGGCAACGGCAACCCGAGTATTGAGACTCTGTGGTCTCTGTGCGTGGCGCTGGATATCCCCTTTGCCCGCCTTCTGGAGCCGCAGGCCGCCAAAACACAGGTCATTCGCCGTGGCGAGGGGACGAAAGTGGTCGCCGAACTGGCGCATTACCAGGCGACACTGCTTGCAACCTGCCCGCCGGGGGCGCGACGCGATATCTATTTTCTTGATACTCAACCCGGGGCTGACCGTATTTCGCAGCCGCATCCGCCCGGTTCAGTTGAGCACATTATCGTGACCCGTGGCCGGGCGATGGTGGGGCTGACGGAAGCGCCAGAAGAATTAAGTGAAGGCGACTACATCTGTTACCCGGCGGATCTGCCACATATTTTTAAGGCGCTGGAGCCGGATACCCAGGCTATTCTGGTGGCGGAACAGAATTAA
PROTEIN sequence
Length: 183
MTQPISVIAKSLVRERLRTGLSLAEIARRAGIAKSTLSQLEAGNGNPSIETLWSLCVALDIPFARLLEPQAAKTQVIRRGEGTKVVAELAHYQATLLATCPPGARRDIYFLDTQPGADRISQPHPPGSVEHIIVTRGRAMVGLTEAPEELSEGDYICYPADLPHIFKALEPDTQAILVAEQN*