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NECEvent2014_6_5_scaffold_2567_2

Organism: NECEvent2014_6_5_Clostridium_sporogenes_29_6_partial

partial RP 15 / 55 BSCG 13 / 51 ASCG 5 / 38 MC: 1
Location: comp(1728..2057)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 109.0
  • Bit_score: 213
  • Evalue 1.50e-52
truA-1; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 109.0
  • Bit_score: 194
  • Evalue 1.40e-47

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 330
ATAGATGCTATGAAAGAAGCTTGTACTTATTTAGTAGGAAGACATGATTTTGCATCTTTTACTGCAGCAAGATCAAAAAAGAAATCTACTATAAGGACTCTTTATAGTATAGATATTATAGAAAAGAATGGATATGTAAATATAGTATATTTAGGTAGTGGATTTTTACATAAAATGATAAGAATATTAACAGGTACTCTTATAGAAGTAGGATTACATAACATGAGTACTATAGACGTAAAAAGCATATTAGAGGCAAAAGATAGAAGAAAAGCAGGATCTACTGCCCCAAGTCAAGGATTATTTATGACCAGTGTAGCTTATGATTAA
PROTEIN sequence
Length: 110
IDAMKEACTYLVGRHDFASFTAARSKKKSTIRTLYSIDIIEKNGYVNIVYLGSGFLHKMIRILTGTLIEVGLHNMSTIDVKSILEAKDRRKAGSTAPSQGLFMTSVAYD*