ggKbase home page

NECEvent2014_6_5_scaffold_3328_2

Organism: NECEvent2014_6_5_Clostridium_sporogenes_29_6_partial

partial RP 15 / 55 BSCG 13 / 51 ASCG 5 / 38 MC: 1
Location: comp(268..1095)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 275.0
  • Bit_score: 543
  • Evalue 1.60e-151
ksgA; dimethyladenosine transferase (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 275.0
  • Bit_score: 520
  • Evalue 2.80e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 828
ATGAATACAAAGGAAATAGTTGAAAAATATCAATTTAAGTTTAATAAAAATTTAGGACAAAATTTTTTAGTAGATGAATCGGTATTGGAAGATATAGTAGAGGGAGCTGAAATAAGCAAAGAAGATACTGTTATAGAAATAGGCCCTGGAGTTGGAACTTTAACTAAAGAGCTTTTAGAAAAGGCAAAAGAAGTTTACTCTATAGAATTAGATGGTGATTTAATACCTATTTTGCAAGAAGAGTTAAAGGAGTATAATAATTTTACCCTAATACATAAAGATGCATTAAAAATTGATTTTAATGGGTTAATGGAAAATAAGGATTCCATAAAATTAGTAGCTAATTTACCTTATTATGTAACCACACCTATTATATCAAGATTACTTACAGAGAAATGTGATTTTAAGTCTCTAACTATAATGATTCAAAAGGAAGTAGCTGAAAGAATAAATGCTGAACCTAACTGTAAGGAGTATGGTTCATTAACTGTTTTAGTACAATATTATTGCAATACAAAAATAATAAGAAAAGTATCTCCAAATTGTTTTATACCAAGACCTAAAGTGGATTCTATAGTTATAAAATTAGATAAACTTTCACAACCAAGAGTAAAGGTGAAAAACGAAAAATTATTTTTTAATGTAGTAAGAAGTTCATTTAATATGAGAAGAAAGACTTTATGGAATTCATTAAAAAGTTTAAATATAGATAAAGAAAATATGGAGAATGCTTTTGAAAGAGCGGAGATAGATTCAAAGCGAAGGGGAGAGACTTTATCTATAGAGGAATTTGGAAAACTTTCAGATTGTATATATGATATATTATAA
PROTEIN sequence
Length: 276
MNTKEIVEKYQFKFNKNLGQNFLVDESVLEDIVEGAEISKEDTVIEIGPGVGTLTKELLEKAKEVYSIELDGDLIPILQEELKEYNNFTLIHKDALKIDFNGLMENKDSIKLVANLPYYVTTPIISRLLTEKCDFKSLTIMIQKEVAERINAEPNCKEYGSLTVLVQYYCNTKIIRKVSPNCFIPRPKVDSIVIKLDKLSQPRVKVKNEKLFFNVVRSSFNMRRKTLWNSLKSLNIDKENMENAFERAEIDSKRRGETLSIEEFGKLSDCIYDIL*