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NECEvent2014_6_5_scaffold_3968_1

Organism: NECEvent2014_6_5_Clostridium_sporogenes_29_6_partial

partial RP 15 / 55 BSCG 13 / 51 ASCG 5 / 38 MC: 1
Location: comp(3..272)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDU38388.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporoge similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 178
  • Evalue 5.60e-42
potCD; spermidine/putrescine transport system permease PotC/spermidine/putrescine-binding periplasmic protein PotD similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 90.0
  • Bit_score: 173
  • Evalue 2.10e-41

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 270
ATGATGAAAAACAATAAAGGGTTACTAAGTAAAATATATGCAACTTTAGTTTATATTTTTTTATATTTGCCAATCTTCGTTCTAGTAGTATTTTCTTTTAATAAGTCTAAACTAAATGCTACCTTTACAGGCTTTACACTAGATTGGTATAAAAATTTAATAAATAATACTCAGATATTAGAAGCATTAAAAAACAGTTTAATAATAGCTTTTATAAGTACTTTTTTTGCAGTAATTATAGGAACTTTAGCTGCTATAGGTATGTATAGA
PROTEIN sequence
Length: 90
MMKNNKGLLSKIYATLVYIFLYLPIFVLVVFSFNKSKLNATFTGFTLDWYKNLINNTQILEALKNSLIIAFISTFFAVIIGTLAAIGMYR