| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| RNA polymerase ECF-type sigma factor | similarity |
KEGG
DB: KEGG |
32.0 | 172.0 | 101 | 2.00e-19 | bbe:BBR47_05420 |
| RNA polymerase sigma-70 factor, ECF subfamily protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JN21_9BACT | similarity |
UNIREF
DB: UNIREF90 |
35.0 | 0.0 | 107 | 4.00e+00 | bbe:BBR47_05420 |
| coiled-coil (db=Coil db_id=coil from=106 to=127 evalue=NA) | iprscan |
interpro
DB: Coil |
0.0 | 0.0 | 0 | 0.0 | bbe:BBR47_05420 |
| no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=4 to=81 evalue=1.0e-17) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 1.00e+00 | bbe:BBR47_05420 |
| seg (db=Seg db_id=seg from=130 to=147) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | bbe:BBR47_05420 |
| (db=HMMPfam db_id=PF04542 from=27 to=80 evalue=1.7e-15 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | bbe:BBR47_05420 |
| (db=HMMPfam db_id=PF08281 from=115 to=166 evalue=1.0e-11 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | bbe:BBR47_05420 |
| sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=8 to=170 evalue=2.6e-39 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:001698 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 2.00e+00 | bbe:BBR47_05420 |
| Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=2 to=77 evalue=2.7e-20 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 2.00e+00 | bbe:BBR47_05420 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=102 to=172 evalue=2.1e-13 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 2.00e+00 | bbe:BBR47_05420 |
| RNA polymerase sigma factor {ECO:0000313|EMBL:KKP36372.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;" |
UNIPROT
DB: UniProtKB |
100.0 | 174.0 | 353 | 1.40e-94 | A0A0G0BZ50_9BACT |