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GWC2_PER_33_13_2_8 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
32.0 172.0 101 2.00e-19 bbe:BBR47_05420
RNA polymerase sigma-70 factor, ECF subfamily protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JN21_9BACT similarity UNIREF
DB: UNIREF90
35.0 0.0 107 4.00e+00 bbe:BBR47_05420
coiled-coil (db=Coil db_id=coil from=106 to=127 evalue=NA) iprscan interpro
DB: Coil
0.0 0.0 0 0.0 bbe:BBR47_05420
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=4 to=81 evalue=1.0e-17) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00 bbe:BBR47_05420
seg (db=Seg db_id=seg from=130 to=147) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 bbe:BBR47_05420
(db=HMMPfam db_id=PF04542 from=27 to=80 evalue=1.7e-15 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 bbe:BBR47_05420
(db=HMMPfam db_id=PF08281 from=115 to=166 evalue=1.0e-11 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 bbe:BBR47_05420
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=8 to=170 evalue=2.6e-39 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:001698 iprscan interpro
DB: HMMTigr
0.0 0.0 0 2.00e+00 bbe:BBR47_05420
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=2 to=77 evalue=2.7e-20 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 bbe:BBR47_05420
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=102 to=172 evalue=2.1e-13 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 bbe:BBR47_05420
RNA polymerase sigma factor {ECO:0000313|EMBL:KKP36372.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;" UNIPROT
DB: UniProtKB
100.0 174.0 353 1.40e-94 A0A0G0BZ50_9BACT