| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| DNA-directed RNA polymerase subunit beta' | similarity |
KEGG
DB: KEGG |
49.4 | 999.99 | 1243 | 0.0 | dmx:X792_02945 |
| DNA-directed RNA polymerase subunit beta' n=8 Tax=Dehalococcoides mccartyi RepID=RPOC_DEHSC rbh | similarity |
UNIREF
DB: UNIREF90 |
49.0 | 0.0 | 1233 | 0.0 | dmx:X792_02945 |
| coiled-coil (db=Coil db_id=coil from=150 to=171 evalue=NA) | iprscan |
interpro
DB: Coil |
0.0 | 0.0 | 0 | 0.0 | dmx:X792_02945 |
| no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=12 to=414 evalue=2.0e-117) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 2.00e+00 | dmx:X792_02945 |
| seg (db=Seg db_id=seg from=206 to=221) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | dmx:X792_02945 |
| (db=HMMPfam db_id=PF04997 from=15 to=411 evalue=9.0e-92 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 9.00e+00 | dmx:X792_02945 |
| (db=HMMPfam db_id=PF04998 from=806 to=1229 evalue=1.0e-54 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | dmx:X792_02945 |
| (db=HMMPfam db_id=PF00623 from=413 to=554 evalue=1.6e-47 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | dmx:X792_02945 |
| (db=HMMPfam db_id=PF04983 from=558 to=699 evalue=2.3e-21 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | dmx:X792_02945 |
| (db=HMMPfam db_id=PF05000 from=729 to=790 evalue=5.6e-09 interpro_id=IPR007083 interpro_description=RNA polymerase Rpb1, domain 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 5.00e+00 | dmx:X792_02945 |
| rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=18 to=1274 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 0.0 | dmx:X792_02945 |
| DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=13 to=1269 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 0.0 | dmx:X792_02945 |
| DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=13 to=1269 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 0.0 | dmx:X792_02945 |
| no description (db=HMMSmart db_id=SM00663 from=302 to=583 evalue=4.5e-164 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 4.00e+00 | dmx:X792_02945 |
| beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=4 to=1282 evalue=0.0) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 0.0 | dmx:X792_02945 |
| RNApol_bact_RpoC (db=HAMAP db_id=MF_01322 from=14 to=1284 evalue=9.705 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HAMAP |
0.0 | 0.0 | 0 | 9.00e+00 | dmx:X792_02945 |
| rpoC; DNA-directed RNA polymerase subunit beta; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated |
UNIPROT
DB: UniProtKB |
100.0 | 999.99 | 2537 | 0.0 | ggdbv1_89394174 |