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GWC2_PER_33_13_4_44 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
ECF family RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
33.5 173.0 110 4.80e-22 csc:Csac_0456
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XGQ9_CALS8 similarity UNIREF
DB: UNIREF90
33.0 0.0 110 6.00e+00 csc:Csac_0456
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=17 to=100 evalue=8.3e-12) iprscan interpro
DB: Gene3D
0.0 0.0 0 8.00e+00 csc:Csac_0456
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=119 to=190 evalue=0.00042 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
0.0 0.0 0 0.0 csc:Csac_0456
(db=HMMPfam db_id=PF04542 from=33 to=98 evalue=5.0e-13 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 5.00e+00 csc:Csac_0456
(db=HMMPfam db_id=PF08281 from=130 to=180 evalue=2.1e-12 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 csc:Csac_0456
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=28 to=184 evalue=4.0e-37 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
0.0 0.0 0 4.00e+00 csc:Csac_0456
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=7 to=119 evalue=9.3e-18 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto iprscan interpro
DB: superfamily
0.0 0.0 0 9.00e+00 csc:Csac_0456
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=116 to=186 evalue=5.7e-15 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct iprscan interpro
DB: superfamily
0.0 0.0 0 5.00e+00 csc:Csac_0456
ECF family RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated UNIPROT
DB: UniProtKB
100.0 194.0 384 6.50e-104 ggdbv1_89393862