| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| ECF family RNA polymerase sigma-24 subunit | similarity |
KEGG
DB: KEGG |
33.5 | 173.0 | 110 | 4.80e-22 | csc:Csac_0456 |
| RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XGQ9_CALS8 | similarity |
UNIREF
DB: UNIREF90 |
33.0 | 0.0 | 110 | 6.00e+00 | csc:Csac_0456 |
| no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=17 to=100 evalue=8.3e-12) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 8.00e+00 | csc:Csac_0456 |
| no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=119 to=190 evalue=0.00042 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 0.0 | csc:Csac_0456 |
| (db=HMMPfam db_id=PF04542 from=33 to=98 evalue=5.0e-13 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 5.00e+00 | csc:Csac_0456 |
| (db=HMMPfam db_id=PF08281 from=130 to=180 evalue=2.1e-12 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | csc:Csac_0456 |
| sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=28 to=184 evalue=4.0e-37 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 4.00e+00 | csc:Csac_0456 |
| Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=7 to=119 evalue=9.3e-18 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 9.00e+00 | csc:Csac_0456 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=116 to=186 evalue=5.7e-15 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 5.00e+00 | csc:Csac_0456 |
| ECF family RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated |
UNIPROT
DB: UniProtKB |
100.0 | 194.0 | 384 | 6.50e-104 | ggdbv1_89393862 |