| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| rluB2; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.22) | similarity |
KEGG
DB: KEGG |
47.1 | 227.0 | 204 | 2.90e-50 | csr:Cspa_c28400 |
| Pseudouridine synthase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJW8_9CLOT | similarity |
UNIREF
DB: UNIREF90 |
47.0 | 0.0 | 204 | 4.00e+00 | csr:Cspa_c28400 |
| S4 (db=ProfileScan db_id=PS50889 from=1 to=68 evalue=14.036 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.40e+01 | csr:Cspa_c28400 |
| (db=HMMPfam db_id=PF00849 from=62 to=193 evalue=6.9e-19 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 6.00e+00 | csr:Cspa_c28400 |
| (db=HMMPfam db_id=PF01479 from=1 to=43 evalue=2.3e-09 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | csr:Cspa_c28400 |
| TIGR00093: pseudouridine synthase (db=HMMTigr db_id=TIGR00093 from=66 to=224 evalue=1.9e-50 interpro_id=IPR000748 interpro_description=Pseudouridine synthase, RsuA/RluB/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 1.00e+00 | csr:Cspa_c28400 |
| RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=5 to=227 evalue=6.8e-68) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 6.00e+00 | csr:Cspa_c28400 |
| no description (db=HMMSmart db_id=SM00363 from=1 to=60 evalue=3.4e-08 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 3.00e+00 | csr:Cspa_c28400 |
| Pseudouridine synthase (db=superfamily db_id=SSF55120 from=58 to=226 evalue=5.2e-36 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 5.00e+00 | csr:Cspa_c28400 |
| Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=1 to=60 evalue=3.6e-13) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 3.00e+00 | csr:Cspa_c28400 |
| PSI_RSU (db=PatternScan db_id=PS01149 from=98 to=112 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) | iprscan |
interpro
DB: PatternScan |
0.0 | 0.0 | 0 | 0.0 | csr:Cspa_c28400 |
| similarity |
in-house
DB: RefSeq |
null | null | null | null | csr:Cspa_c28400 | |
| Pseudouridine synthase {ECO:0000313|EMBL:KKP37742.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;" |
UNIPROT
DB: UniProtKB |
100.0 | 228.0 | 448 | 5.70e-123 | A0A0G0C380_9BACT |
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